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BaseInfo

ncRNA ID novel_gma_miR3373
Species Glycine max
Class miRNA
Genome position Chr12:35590127-35590209 [-]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 21
Mature sequence(if miRNA) 1 - AUGUAACUUUGACAACUAUUA - 21
Stem-loop(if miRNA) --                  -                    U
  AUAGUUGUCAAAGUUAUA CGGUGUAAUUUGAUUUCUCC U
  |||||||||||||||||| ||||||||||||||||||||
  UAUCAACAGUUUCAAUGU GUUAUAUUAAACUAGAGAGG A
AU                  A                    A
Stem-loop sequence AUAGUUGUCAAAGUUAUACGGUGUAAUUUGAUUUCUCCUUAAGGAGAGAUCAAAUUAUAUUGAUGUAACUUUGACAACUAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534942.3
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||*||||*||||||||||||
targets:786   AAACAGUUUUCAAAGUUACAU   806

2.5 PREDICTED: Glycine max DNA-directed RNA polymerases IV and V subunit 4-like (LOC100809792), mRNA DNA-directed RNA polymerases IV and V subunit 4-like(LOC100809792) coding protein psRNATarget
XM_006597563.2
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||*||||*||||||||||||
targets:804   AAACAGUUUUCAAAGUUACAU   824

2.5 PREDICTED: Glycine max DNA-directed RNA polymerases IV and V subunit 4-like (LOC100775535), transcript variant X2, mRNA DNA-directed RNA polymerases IV and V subunit 4-like(LOC100775535) coding protein psRNATarget
XM_006597562.2
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||*||||*||||||||||||
targets:809   AAACAGUUUUCAAAGUUACAU   829

2.5 PREDICTED: Glycine max DNA-directed RNA polymerases IV and V subunit 4-like (LOC100775535), transcript variant X1, mRNA DNA-directed RNA polymerases IV and V subunit 4-like(LOC100775535) coding protein psRNATarget
XM_014765557.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X21, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765543.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X3, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765547.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X9, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765552.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X16, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765556.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X20, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765555.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X19, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765545.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:694   CAAUAUUUAUCAAAGUUACAU   714

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X7, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765554.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:695   CAAUAUUUAUCAAAGUUACAU   715

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X18, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765541.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X1, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765550.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:692   CAAUAUUUAUCAAAGUUACAU   712

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X13, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765551.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X14, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765548.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:691   CAAUAUUUAUCAAAGUUACAU   711

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X10, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765549.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:692   CAAUAUUUAUCAAAGUUACAU   712

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X11, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765542.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:791   CAAUAUUUAUCAAAGUUACAU   811

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X2, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765553.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:692   CAAUAUUUAUCAAAGUUACAU   712

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X17, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
XM_014765546.1
ncRNA:21   AUUAUCAACAGUUUCAAUGUA   1
  *||||*||*||||||||||||
targets:693   CAAUAUUUAUCAAAGUUACAU   713

2.5 PREDICTED: Glycine max probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial (LOC100777469), transcript variant X8, mRNA probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial(LOC100777469) coding protein psRNATarget
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