ncRNA ID | novel_gma_miR3372 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:2017841-2017951 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 21 |
Mature sequence(if miRNA) | 91 - UAUGUAUCUUUAGUACCACUG - 111 |
Stem-loop(if miRNA) |
-GUA         C  U       UGUU      -    UA   C        GUAA     GGUGCUGGA AU UGUAAUA    AUUGUG AGUC  GGU GGUUCCUU    C     ||||||||| || |||||||    |||||| ||||  ||| ||||||||     CCAUGAUUU UA GUAUUAU    UAAUAC UCAG  UCG CCAAGGAG    A GUCA         C  U       -UCC      A    --   A        ACCA |
Stem-loop sequence | GUAGGUGCUGGACAUUUGUAAUAUGUUAUUGUGAGUCUAGGUCGGUUCCUUGUAACAACCAGAGGAACCAGCUGACUACAUAAUCCUUAUUAUGUAUCUUUAGUACCACUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003548878.3 |
|
2.5 | PREDICTED: Glycine max B3 domain-containing transcription factor FUS3-like (LOC100783961), mRNA | B3 domain-containing transcription factor FUS3-like(LOC100783961) | coding protein | psRNATarget | |||||||||
XM_003553925.3 |
|
2.5 | PREDICTED: Glycine max B3 domain-containing transcription factor FUS3-like (LOC100813055), mRNA | B3 domain-containing transcription factor FUS3-like(LOC100813055) | coding protein | psRNATarget |