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BaseInfo

ncRNA ID novel_gma_miR3372
Species Glycine max
Class miRNA
Genome position Chr12:2017841-2017951 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 21
Mature sequence(if miRNA) 91 - UAUGUAUCUUUAGUACCACUG - 111
Stem-loop(if miRNA) -GUA         C  U       UGUU      -    UA   C        GUAA
    GGUGCUGGA AU UGUAAUA    AUUGUG AGUC  GGU GGUUCCUU    C
    ||||||||| || |||||||    |||||| ||||  ||| ||||||||
    CCAUGAUUU UA GUAUUAU    UAAUAC UCAG  UCG CCAAGGAG    A
GUCA         C  U       -UCC      A    --   A        ACCA
Stem-loop sequence GUAGGUGCUGGACAUUUGUAAUAUGUUAUUGUGAGUCUAGGUCGGUUCCUUGUAACAACCAGAGGAACCAGCUGACUACAUAAUCCUUAUUAUGUAUCUUUAGUACCACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548878.3
ncRNA:21   GUCACCAUGAUUUCUAUGUAU   1
  =**||||||||||||*|||||
targets:1634   UUUUGGUACUAAAGAAACAUA   1654

2.5 PREDICTED: Glycine max B3 domain-containing transcription factor FUS3-like (LOC100783961), mRNA B3 domain-containing transcription factor FUS3-like(LOC100783961) coding protein psRNATarget
XM_003553925.3
ncRNA:21   GUCACCAUGAUUUCUAUGUAU   1
  =**||||||||||||*|||||
targets:1980   UUUUGGUACUAAAGAAACAUA   2000

2.5 PREDICTED: Glycine max B3 domain-containing transcription factor FUS3-like (LOC100813055), mRNA B3 domain-containing transcription factor FUS3-like(LOC100813055) coding protein psRNATarget