Search result

BaseInfo

ncRNA ID novel_gma_miR3369
Species Glycine max
Class miRNA
Genome position Chr9:24574249-24574292 [-]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 21
Mature sequence(if miRNA) 1 - GAUGGUAUGAUAAAUGAAUAA - 21
Stem-loop(if miRNA) --     A      A      U
  AUUUA UUAUUA AUCAUU U
  ||||| |||||| ||||||
  UAAGU AAUAGU UGGUAG U
AA     A      A      U
Stem-loop sequence AUUUAAUUAUUAAAUCAUUUUUUGAUGGUAUGAUAAAUGAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537865.3
ncRNA:21   AAUAAGUAAAUAGUAUGGUAG   1
  ***||*|||||||||||||||
targets:421   GCUUUGAUUUAUCAUACCAUC   441

2.0 PREDICTED: Glycine max diphthamide biosynthesis protein 3 (LOC100500529), mRNA diphthamide biosynthesis protein 3(LOC100500529) coding protein psRNATarget
BT091466.1
ncRNA:21   AAUAAG-UAAAUAGUAUGGUAG   1
  ***|||-|||||||||||||||
targets:329   GGCUUCGAUUUAUCAUACCAUC   350

3.0 Soybean clone JCVI-FLGm-8E13 unknown mRNA NA coding protein psRNATarget