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BaseInfo

ncRNA ID novel_gma_miR3368
Species Glycine max
Class miRNA
Genome position Chr9:47779233-47779370 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 119 - AUUUUCAAACUUUGACACAA - 138
Stem-loop(if miRNA) --            A         U      ---        UAAU            A  -AAA      C
  GUGUCAAAGUUU AAAAUAAAA UAAUUU   UAAAAAAA    UCUUUCUUUUGA AG    GUUCUU C
  |||||||||||| ||||||||| ||||||   ||||||||    |||||||||||| ||    ||||||
  CACAGUUUCAAA UUUUAUUUU AUUAAA   AUUUUUUU    AGGAAGAAGACU UC    CAAGAA A
AA            C         U      AAA        --UU            A  GAAA      A
Stem-loop sequence GUGUCAAAGUUUAAAAAUAAAAUUAAUUUUAAAAAAAUAAUUCUUUCUUUUGAAAGAAAGUUCUUCCAAAAGAACAAAGCUAUCAGAAGAAGGAUUUUUUUUUAAAAAAAUUAUUUUUAUUUUCAAACUUUGACACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777307.1
ncRNA:20   AACACAGUUUCAAACUUUUA   1
  *||*||||||||*|||||||
targets:1767   AUGAGUCAAAGUAUGAAAAU   1786

2.5 PREDICTED: Glycine max far upstream element-binding protein 2-like (LOC100800173), transcript variant X2, mRNA far upstream element-binding protein 2-like(LOC100800173) coding protein psRNATarget
XM_014777306.1
ncRNA:20   AACACAGUUUCAAACUUUUA   1
  *||*||||||||*|||||||
targets:1771   AUGAGUCAAAGUAUGAAAAU   1790

2.5 PREDICTED: Glycine max far upstream element-binding protein 2-like (LOC100800173), transcript variant X1, mRNA far upstream element-binding protein 2-like(LOC100800173) coding protein psRNATarget