ncRNA ID | novel_gma_miR3368 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:47779233-47779370 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 119 - AUUUUCAAACUUUGACACAA - 138 |
Stem-loop(if miRNA) |
--            A         U      ---        UAAU            A  -AAA      C   GUGUCAAAGUUU AAAAUAAAA UAAUUU   UAAAAAAA    UCUUUCUUUUGA AG    GUUCUU C   |||||||||||| ||||||||| ||||||   ||||||||    |||||||||||| ||    ||||||   CACAGUUUCAAA UUUUAUUUU AUUAAA   AUUUUUUU    AGGAAGAAGACU UC    CAAGAA A AA            C         U      AAA        --UU            A  GAAA      A |
Stem-loop sequence | GUGUCAAAGUUUAAAAAUAAAAUUAAUUUUAAAAAAAUAAUUCUUUCUUUUGAAAGAAAGUUCUUCCAAAAGAACAAAGCUAUCAGAAGAAGGAUUUUUUUUUAAAAAAAUUAUUUUUAUUUUCAAACUUUGACACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014777307.1 |
|
2.5 | PREDICTED: Glycine max far upstream element-binding protein 2-like (LOC100800173), transcript variant X2, mRNA | far upstream element-binding protein 2-like(LOC100800173) | coding protein | psRNATarget | |||||||||
XM_014777306.1 |
|
2.5 | PREDICTED: Glycine max far upstream element-binding protein 2-like (LOC100800173), transcript variant X1, mRNA | far upstream element-binding protein 2-like(LOC100800173) | coding protein | psRNATarget |