ncRNA ID | novel_gma_miR3364 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:14613607-14613695 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GAGUGAUAGUGAAAAAAGGC - 20 |
Stem-loop(if miRNA) |
--   U  U         --A    --------UCUCU     -UU    A   GAG GA AGUGAAAAA   GGCC             AGUAG   UCAA C   ||| || |||||||||   ||||             |||||   ||||   UUC CU UUAUUUUUU   UUGG             UCGUU   AGUU U CU   -  -         GUU    UUUCUUUUCUACU     GCU    U |
Stem-loop sequence | GAGUGAUAGUGAAAAAAGGCCUCUCUAGUAGUUUCAAACUUUUGAUCGUUGCUUCAUCUUUUCUUUGGUUUUGUUUUUUAUUUCCUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001248529.2 |
|
2.5 | Glycine max uncharacterized LOC100306210 (LOC100306210), mRNA | uncharacterized LOC100306210(LOC100306210) | coding protein | psRNATarget | |||||||||
BT090206.1 |
|
2.5 | Soybean clone JCVI-FLGm-3L20 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003545755.3 |
|
2.5 | PREDICTED: Glycine max calcium-binding protein PBP1-like (LOC100799975), mRNA | calcium-binding protein PBP1-like(LOC100799975) | coding protein | psRNATarget |