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BaseInfo

ncRNA ID novel_gma_miR3354
Species Glycine max
Class miRNA
Genome position Chr7:384646-384688 [-]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 1 - UAGGGUUUUUGUGAUCUGCA - 20
Stem-loop(if miRNA) --   -C      U   U   UC
  CAG  CAUAGA AGC CCU  A
  |||  |||||| ||| |||
  GUC  GUGUUU UUG GGA  A
AC   UA      -   -   UU
Stem-loop sequence CAGCCAUAGAUAGCUCCUUCAAUUAGGGUUUUUGUGAUCUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774769.1
ncRNA:20   ACGUCUAGUGUUUUUGGGAU   1
  *||||=|||*||||||||||
targets:215   CGCAGGUCAGAAAAACCCUA   234

2.5 PREDICTED: Glycine max 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like (LOC100777775), transcript variant X2, mRNA 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like(LOC100777775) coding protein psRNATarget
XM_003523005.3
ncRNA:20   ACGUCUAGUGUUUUUGGGAU   1
  *||||=|||*||||||||||
targets:210   CGCAGGUCAGAAAAACCCUA   229

2.5 PREDICTED: Glycine max 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like (LOC100777775), transcript variant X1, mRNA 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like(LOC100777775) coding protein psRNATarget