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BaseInfo

ncRNA ID	novel_gma_miR3352
Species	Glycine max
Class	miRNA
Genome position	Chr7:15229458-15229570 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - AUUUUGAUUGGAGAACAGCA - 20
Stem-loop(if miRNA)	--              U    AAAG         UACAAUU      AUAAA     GCA   UUGUUCUCUAAUCA AAUU    UUUUACCUC       UGCUUA     AGUUU   C   |||||||||||||| ||||    |||||||||       ||||||     |||||   GACAAGAGGUUAGU UUAA    AAAGUGGAG       AUGAGU     UUAGG   U AC              U    CAAA         ---CUAU      ----A     AAA
Stem-loop sequence	UUGUUCUCUAAUCAUAAUUAAAGUUUUACCUCUACAAUUUGCUUAAUAAAAGUUUGCACUAAAGGAUUAUGAGUAUAUCGAGGUGAAAAAACAAUUUUGAUUGGAGAACAGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006585935.2	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   |*=||||||||||||||||| targets:427   UAUUGUUCUCCAAUCAAAAU   446 Target Full Sequence	2.0	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X3, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_006585934.2	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   |*=||||||||||||||||| targets:427   UAUUGUUCUCCAAUCAAAAU   446 Target Full Sequence	2.0	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X2, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_003554034.3	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   ||=|||||||||||=||||| targets:2010   UGUUGUUCUCCAAUUAAAAU   2029 Target Full Sequence	2.5	PREDICTED: Glycine max ABSCISIC ACID-INSENSITIVE 5-like protein 2 (LOC100783666), mRNA	ABSCISIC ACID-INSENSITIVE 5-like protein 2(LOC100783666)	coding protein	psRNATarget
XM_014773951.1	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   *|||||||||*||||||||* targets:1075   AGCUGUUCUCAAAUCAAAAA   1094 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100786637), transcript variant X2, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100786637)	coding protein	psRNATarget
XM_014771947.1	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   *|||||||||*||||||||* targets:1075   AGCUGUUCUCAAAUCAAAAA   1094 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X2, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134)	coding protein	psRNATarget
XM_003520696.2	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   *|||||||||*||||||||* targets:1343   AGCUGUUCUCAAAUCAAAAA   1362 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100786637), transcript variant X1, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100786637)	coding protein	psRNATarget
XM_003553611.3	ncRNA:20   ACGACAAGAGGUUAGUUUUA   1   *|||||||||*||||||||* targets:1364   AGCUGUUCUCAAAUCAAAAA   1383 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X1, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134)	coding protein	psRNATarget