Search result

BaseInfo

ncRNA ID	novel_gma_miR3351
Species	Glycine max
Class	miRNA
Genome position	Chr7:15267921-15267972 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - CUCUGUUGAAUGUAGAACGC - 20
Stem-loop(if miRNA)	----G       AG        CU  U      UUAUAUU  AGCGGAGA  CU U      |||||||  ||||||||  || C      GAUGUAA  UUGUCUCU  GA C CGCAA       -G        UG  U
Stem-loop sequence	GUUAUAUUAGAGCGGAGACUCUUUCCUAGGUUCUCUGUUGAAUGUAGAACGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014766318.1	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   ***|||*||||||||||||| targets:35   AGUUUCCACAUUCAACAGAG   54 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100792214 (LOC100792214), mRNA	uncharacterized LOC100792214(LOC100792214)	coding protein	psRNATarget
XM_006574577.2	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X9, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_014764840.1	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X8, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_014764835.1	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X7, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_006574575.2	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X4, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_006574574.2	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:770   UUGAUCCACAUUCAACAGAG   789 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X3, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_006574576.2	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X5, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_006574573.2	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:777   UUGAUCCACAUUCAACAGAG   796 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X2, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_014764833.1	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X6, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget
XM_006574572.2	ncRNA:20   CGCAAGAUGUAAGUUGUCUC   1   *=|*||*||||||||||||| targets:825   UUGAUCCACAUUCAACAGAG   844 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100807505 (LOC100807505), transcript variant X1, mRNA	uncharacterized LOC100807505(LOC100807505)	coding protein	psRNATarget