ncRNA ID | novel_gma_miR3345 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:20776286-20776376 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 21 |
Mature sequence(if miRNA) | 71 - CUUGGUGGAGUACUUAAGUGG - 91 |
Stem-loop(if miRNA) |
--       G            G     ---U    A   A    UAGU   CUUGGUG AGUACUUAAGUG CUUGG    UCUU CCC UUGA    U   ||||||| |||||||||||| |||||    |||| ||| ||||   GGACUAU UCGUGGGUUCGU GAAUC    GGGA GGG AAUU    A UU       -            -     CUUU    -   -    UUAG |
Stem-loop sequence | CUUGGUGGAGUACUUAAGUGGCUUGGUUCUUACCCAUUGAUAGUUAGAUUUUAAGGGAGGGUUUCCUAAGUGCUUGGGUGCUUAUCAGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098002.1 |
|
2.5 | Soybean clone JCVI-FLGm-22H2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003538114.3 |
|
3.0 | PREDICTED: Glycine max aspartic proteinase-like protein 2 (LOC100811632), mRNA | aspartic proteinase-like protein 2(LOC100811632) | coding protein | psRNATarget | |||||||||
XM_003551852.3 |
|
3.0 | PREDICTED: Glycine max glucose-6-phosphate/phosphate translocator 1, chloroplastic-like (LOC100801832), mRNA | glucose-6-phosphate/phosphate translocator 1, chloroplastic-like(LOC100801832) | coding protein | psRNATarget |