ncRNA ID | novel_gma_miR3344 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:41492153-41492242 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUUGGUUGGUUGUGUUGAA - 21 |
Stem-loop(if miRNA) |
--      C    -      UCACUUCCCUCCCUUU         U   CAACAC GCUA CCAAGA                GUUUCAGAU A   |||||| |||| ||||||                ||||||||| G   GUUGUG UGGU GGUUUU                UAAAGUUUA A AA      U    U      --UUUUUUGUAAAAGU         C |
Stem-loop sequence | CAACACCGCUACCAAGAUCACUUCCCUCCCUUUGUUUCAGAUUAGACAUUUGAAAUUGAAAAUGUUUUUUUUUUGGUUGGUUGUGUUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098695.1 |
|
1.0 | Soybean clone JCVI-FLGm-23I8 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003547677.3 |
|
2.0 | PREDICTED: Glycine max CASP-like protein 4A1 (LOC100818485), mRNA | CASP-like protein 4A1(LOC100818485) | coding protein | psRNATarget | |||||||||
XM_006603842.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102659957 (LOC102659957), mRNA | uncharacterized LOC102659957(LOC102659957) | coding protein | psRNATarget |