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BaseInfo

ncRNA ID	novel_gma_miR3340
Species	Glycine max
Class	miRNA
Genome position	Chr5:5955188-5955302 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	21
Mature sequence(if miRNA)	1 - AAGCCUUUUACGGAACAAUAC - 21
Stem-loop(if miRNA)	--                                         CU           A   AAGCCUUUUACGGAACAAUACGGAUCAACAUGAUCCGUAAG  UUUUACGGAUC A   |||||||||||||||||||||||||||||||||||||||||  ||||||||||| C   UUCGGAAAAUGUCUUGUUAUGCCUAGUUGUACUAGGCAUUU  AGAAUGCCUAG U CA                                         UC           U
Stem-loop sequence	AAGCCUUUUACGGAACAAUACGGAUCAACAUGAUCCGUAAGCUUUUUACGGAUCAACUUGAUCCGUAAGACUUUUACGGAUCAUGUUGAUCCGUAUUGUUCUGUAAAAGGCUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK246037.1	ncRNA:21   CAUAACAAGGCAUUUUCCGAA   1   |||*||||||||||||*|||| targets:682   GUAGUGUUCCGUAAAAAGCUU   702 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-49-H03	NA	coding protein	psRNATarget
NM_001251391.2	ncRNA:21   CAUAACAAGGCAUUUUCCGAA   1   |||*||||||||||||*|||| targets:731   GUAGUGUUCCGUAAAAAGCUU   751 Target Full Sequence	2.5	Glycine max V-type proton ATPase subunit E-like protein (LOC100500452), mRNA	uncharacterized LOC100500452(LOC100500452)	coding protein	psRNATarget
AK285829.1	ncRNA:21   CAUAACAAGGCAUUUUCCGAA   1   |||*||||||||||||*|||| targets:725   GUAGUGUUCCGUAAAAAGCUU   745 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-17-C14	NA	coding protein	psRNATarget
XM_006584679.2	ncRNA:21   CAUAACAAGGCAUUUUCCGAA   1   |||*||||||||||||*|||| targets:758   GUAGUGUUCCGUAAAAAGCUU   778 Target Full Sequence	2.5	PREDICTED: Glycine max V-type proton ATPase subunit E-like (LOC106794127), mRNA	V-type proton ATPase subunit E-like(LOC106794127)	coding protein	psRNATarget