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BaseInfo

ncRNA ID novel_gma_miR3335
Species Glycine max
Class miRNA
Genome position Chr4:28667119-28667201 [-]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 64 - UUUGUUUGAAUGGAGAAAAA - 83
Stem-loop(if miRNA) --      U   U      AAAACU           U    AAAU
  UUUGUU GAA GGAGAA      AGGGGAGAAAA UUGG    U
  |||||| ||| ||||||      ||||||||||| ||||
  AAACAA CUU UCUUUU      UCCUCUCUUUU AACU    U
UA      -   U      ------           C    GAAA
Stem-loop sequence UUUGUUUGAAUGGAGAAAAAACUAGGGGAGAAAAUUUGGAAAUUUAAAGUCAACUUUUCUCUCCUUUUUCUUUUCAACAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006596370.2
ncRNA:20   AAAAAGAGGUAAGUUUGUUU   1
  *|||||*||||||||=||||
targets:1367   CUUUUCCCCAUUCAAGCAAA   1386

2.5 PREDICTED: Glycine max RING-H2 finger protein ATL63-like (LOC100777829), mRNA RING-H2 finger protein ATL63-like(LOC100777829) coding protein psRNATarget