ncRNA ID | novel_gma_miR3335 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:28667119-28667201 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 64 - UUUGUUUGAAUGGAGAAAAA - 83 |
Stem-loop(if miRNA) |
--      U   U      AAAACU           U    AAAU   UUUGUU GAA GGAGAA      AGGGGAGAAAA UUGG    U   |||||| ||| ||||||      ||||||||||| ||||   AAACAA CUU UCUUUU      UCCUCUCUUUU AACU    U UA      -   U      ------           C    GAAA |
Stem-loop sequence | UUUGUUUGAAUGGAGAAAAAACUAGGGGAGAAAAUUUGGAAAUUUAAAGUCAACUUUUCUCUCCUUUUUCUUUUCAACAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006596370.2 |
|
2.5 | PREDICTED: Glycine max RING-H2 finger protein ATL63-like (LOC100777829), mRNA | RING-H2 finger protein ATL63-like(LOC100777829) | coding protein | psRNATarget |