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BaseInfo

ncRNA ID	novel_gma_miR3334
Species	Glycine max
Class	miRNA
Genome position	Chr4:42814872-42814981 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - AUAAGAAUGAUUCUUUGUAG - 20
Stem-loop(if miRNA)	GCUGG          ----     -U    U      ----UCU    UGUU      U      UAGAGAAUUA    UAUUU  UUAG GUGUAG       GGAU    AGGAGG A      ||||||||||    |||||  |||| ||||||       ||||    |||||| U      GUUUCUUAGU    AUAAA  GAUU UAUAUC       UUUG    UCCUCU U --GAU          AAGA     CU    U      UUUAAAU    UGUU      G
Stem-loop sequence	GCUGGUAGAGAAUUAUAUUUUUUAGUGUGUAGUCUGGAUUGUUAGGAGGUAUUGUCUCCUUUGUGUUUUAAAUUUCUAUAUUUUAGUCAAAUAAGAAUGAUUCUUUGUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006573569.2	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   =*|||||||||=|||||||| targets:354   UGACAAAGAAUUAUUCUUAU   373 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100794704 (LOC100794704), transcript variant X9, mRNA	uncharacterized LOC100794704(LOC100794704)	coding protein	psRNATarget
XM_014776125.1	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   =*|||||||||=|||||||| targets:354   UGACAAAGAAUUAUUCUUAU   373 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100794704 (LOC100794704), transcript variant X10, mRNA	uncharacterized LOC100794704(LOC100794704)	coding protein	psRNATarget
XM_014776124.1	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   =*|||||||||=|||||||| targets:354   UGACAAAGAAUUAUUCUUAU   373 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100794704 (LOC100794704), transcript variant X8, mRNA	uncharacterized LOC100794704(LOC100794704)	coding protein	psRNATarget
XM_006600074.2	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   *|||||||||||*||||||* targets:789   GUACAAAGAAUCCUUCUUAA   808 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500016 (LOC100500016), transcript variant X1, mRNA	uncharacterized LOC100500016(LOC100500016)	coding protein	psRNATarget
XM_003542569.3	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   =|||*|||*||||||||||| targets:415   UUACUAAGCAUCAUUCUUAU   434 Target Full Sequence	2.5	PREDICTED: Glycine max WD repeat-containing protein 76-like (LOC100799581), mRNA	WD repeat-containing protein 76-like(LOC100799581)	coding protein	psRNATarget
XM_014763547.1	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   =|=|*||||||||||||||* targets:1873   UUGCCAAGAAUCAUUCUUAC   1892 Target Full Sequence	3.0	PREDICTED: Glycine max pollen receptor-like kinase 2 (LOC100785189), transcript variant X2, mRNA	pollen receptor-like kinase 2(LOC100785189)	coding protein	psRNATarget
XM_014763532.1	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   =|=|*||||||||||||||* targets:2056   UUGCCAAGAAUCAUUCUUAC   2075 Target Full Sequence	3.0	PREDICTED: Glycine max pollen receptor-like kinase 2 (LOC100785189), transcript variant X1, mRNA	pollen receptor-like kinase 2(LOC100785189)	coding protein	psRNATarget
BT093975.1	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   *|*|=||||||||||||||* targets:528   AUUCGAAGAAUCAUUCUUAG   547 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-18A17 unknown mRNA	NA	coding protein	psRNATarget
U64916.1	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   *|*|=||||||||||||||* targets:94   AUUCGAAGAAUCAUUCUUAG   113 Target Full Sequence	3.0	Glycine max farnesylated protein GMFP5 mRNA, partial cds	NA	coding protein	psRNATarget
XM_003542479.3	ncRNA:20   GAUGUUUCUUAGUAAGAAUA   1   *|*|=||||||||||||||* targets:548   AUUCGAAGAAUCAUUCUUAG   567 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC547884 (LOC547884), mRNA	uncharacterized LOC547884(LOC547884)	coding protein	psRNATarget