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BaseInfo

ncRNA ID	novel_gma_miR3329
Species	Glycine max
Class	miRNA
Genome position	Chr3:3142912-3143075 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - UUGCAAGGACUAAAAUGAAA - 20
Stem-loop(if miRNA)	--                      UG            U     G       GU                -U  C  UUC   G   UCAUUUUAGUCCUUGUAAAAUG  UUUGUUUUAUUU UUGUC UUAGAGU  UUUAGAUAACAUUUUU  CA UA   AAA C   ||||||||||||||||||||||  |||||||||||| ||||| |||||||  ||||||||||||||||  || ||   |||   AGUAAAAUCAGGAACGUUUUAU  AAACAAAAUAAA AGCAG AAUUUCG  AAAUCUAUUGUGAAAA  GU AU   UUU U AA                      GA            U     G       --                CU  U  -UU   C
Stem-loop sequence	UCAUUUUAGUCCUUGUAAAAUGUGUUUGUUUUAUUUUUUGUCGUUAGAGUGUUUUAGAUAACAUUUUUUCACUAUUCAAAGCUCUUUUUUAUUGUCAAAAGUGUUAUCUAAAGCUUUAAGGACGAUAAAUAAAACAAAAGUAUUUUGCAAGGACUAAAAUGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006599087.2	ncRNA:20   AAAGUAAAAUCAGGAACGUU   1   ||||||||||||||||*||= targets:3136   UUUCAUUUUAGUCCUUACAG   3155 Target Full Sequence	2.5	PREDICTED: Glycine max TMV resistance protein N-like (LOC100806743), transcript variant X2, mRNA	TMV resistance protein N-like(LOC100806743)	coding protein	psRNATarget
XM_003548581.3	ncRNA:20   AAAGUAAAAUCAGGAACGUU   1   ||||||||||||||||*||= targets:3531   UUUCAUUUUAGUCCUUACAG   3550 Target Full Sequence	2.5	PREDICTED: Glycine max TMV resistance protein N-like (LOC100806743), transcript variant X1, mRNA	TMV resistance protein N-like(LOC100806743)	coding protein	psRNATarget
AK245260.1	ncRNA:20   AAAGUAAAAUCAGGAACGUU   1   *||||*|||||||||||=|| targets:495   CUUCAAUUUAGUCCUUGUAA   514 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-25-E18	NA	coding protein	psRNATarget
AK286107.1	ncRNA:20   AAAGUAAAAUCAGGAACGUU   1   *||||*|||||||||||=|| targets:545   CUUCAAUUUAGUCCUUGUAA   564 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-22-A11	NA	coding protein	psRNATarget
XM_003534393.2	ncRNA:20   AAAGUAAAAUCAGGAACGUU   1   *||||*|||||||||||=|| targets:674   CUUCAAUUUAGUCCUUGUAA   693 Target Full Sequence	2.5	PREDICTED: Glycine max expansin-A1 (LOC100790170), mRNA	expansin-A1(LOC100790170)	coding protein	psRNATarget
XM_003552487.3	ncRNA:20   AAAGUAAAAUCAGGAACGUU   1   *||||*|||||||||||=|| targets:618   CUUCAAUUUAGUCCUUGUAA   637 Target Full Sequence	2.5	PREDICTED: Glycine max expansin-A1 (LOC100791784), mRNA	expansin-A1(LOC100791784)	coding protein	psRNATarget