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BaseInfo

ncRNA ID novel_gma_miR3327
Species Glycine max
Class miRNA
Genome position Chr3:33704291-33704401 [-]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 21
Mature sequence(if miRNA) 1 - UAUGUAUCUUUAGUACCACUG - 21
Stem-loop(if miRNA) -GUA         C  U       UGUU      -    U    C        GUAA
    GGUGCUGGA AU UGUAAUA    AUUGUG AGUC AGCU GGUUCCUU    C
    ||||||||| || |||||||    |||||| |||| |||| ||||||||
    CCAUGAUUU UA GUAUUAU    UAAUAC UCAG UCGA CCAAGGAA    A
GUCA         C  U       -UCC      A    -    -        ACCA
Stem-loop sequence GUAGGUGCUGGACAUUUGUAAUAUGUUAUUGUGAGUCUAGCUCGGUUCCUUGUAACAACCAAAGGAACCAGCUGACUACAUAAUCCUUAUUAUGUAUCUUUAGUACCACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548878.3
ncRNA:21   GUCACCAUGAUUUCUAUGUAU   1
  =**||||||||||||*|||||
targets:1634   UUUUGGUACUAAAGAAACAUA   1654

2.5 PREDICTED: Glycine max B3 domain-containing transcription factor FUS3-like (LOC100783961), mRNA B3 domain-containing transcription factor FUS3-like(LOC100783961) coding protein psRNATarget
XM_003553925.3
ncRNA:21   GUCACCAUGAUUUCUAUGUAU   1
  =**||||||||||||*|||||
targets:1980   UUUUGGUACUAAAGAAACAUA   2000

2.5 PREDICTED: Glycine max B3 domain-containing transcription factor FUS3-like (LOC100813055), mRNA B3 domain-containing transcription factor FUS3-like(LOC100813055) coding protein psRNATarget