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BaseInfo

ncRNA ID novel_gma_miR3325
Species Glycine max
Class miRNA
Genome position Chr3:39452010-39452157 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 1 - CUGACAUUCACAAUUAUUUU - 20
Stem-loop(if miRNA) ------C    A        UAU        G       -  -UAA      UUU     -UU   AAUAAUUCCUAAAAUAU    UU
       UGAC UUCACAAU   UUUAUUCU UUUUUAG GA    UUAGCU   GACUU   GAG                 GCCA  C
       |||| ||||||||   |||||||| ||||||| ||    ||||||   |||||   |||                 ||||  A
       GCUG GAGUGUUG   AAAUAAGA AAAAAUC CU    AAUCGG   UUGAA   CUC                 CGGU  G
AGGCACA    -        ---        -       A  UCUC      --U     CAC   -----------------    CU
Stem-loop sequence CUGACAUUCACAAUUAUUUUAUUCUGUUUUUAGGAUAAUUAGCUUUUGACUUUUGAGAAUAAUUCCUAAAAUAUGCCAUUCAGUCUGGCCUCCACAAGUUUGGCUAACUCUUCACUAAAAAAGAAUAAAGUUGUGAGGUCGACACGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097578.1
ncRNA:20   UUUUAUUAACACUUACAGUC   1
  ||*|||*||||||||||||*
targets:494   AACAUAUUUGUGAAUGUCAU   513

3.0 Soybean clone JCVI-FLGm-22A20 unknown mRNA NA coding protein psRNATarget
BT097572.1
ncRNA:20   UUUUAUUAACACUUACAGUC   1
  ||*|||*||||||||||||*
targets:494   AACAUAUUUGUGAAUGUCAU   513

3.0 Soybean clone JCVI-FLGm-26C16 unknown mRNA NA coding protein psRNATarget