ncRNA ID | novel_gma_miR3325 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:39452010-39452157 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CUGACAUUCACAAUUAUUUU - 20 |
Stem-loop(if miRNA) |
------C    A        UAU        G       -  -UAA      UUU     -UU   AAUAAUUCCUAAAAUAU    UU        UGAC UUCACAAU   UUUAUUCU UUUUUAG GA    UUAGCU   GACUU   GAG                 GCCA  C        |||| ||||||||   |||||||| ||||||| ||    ||||||   |||||   |||                 ||||  A        GCUG GAGUGUUG   AAAUAAGA AAAAAUC CU    AAUCGG   UUGAA   CUC                 CGGU  G AGGCACA    -        ---        -       A  UCUC      --U     CAC   -----------------    CU |
Stem-loop sequence | CUGACAUUCACAAUUAUUUUAUUCUGUUUUUAGGAUAAUUAGCUUUUGACUUUUGAGAAUAAUUCCUAAAAUAUGCCAUUCAGUCUGGCCUCCACAAGUUUGGCUAACUCUUCACUAAAAAAGAAUAAAGUUGUGAGGUCGACACGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT097578.1 |
|
3.0 | Soybean clone JCVI-FLGm-22A20 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT097572.1 |
|
3.0 | Soybean clone JCVI-FLGm-26C16 unknown mRNA | NA | coding protein | psRNATarget |