ncRNA ID | novel_gma_miR3323 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:8394642-8394733 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 73 - UUUUGGACAUUGAAUUUUGU - 92 |
Stem-loop(if miRNA) |
--      G --   U      -   GU     G   UUUUCCU   C  UA   AAAAUU A  GUC CAAAAU UGA  UGCUA CAU       CCC GU  U   |||||| |  ||| |||||| |||  ||||| |||       ||| ||   UUUUAA U  CAG GUUUUA ACU  AUGGU GUA       GGG CG  U UG      G UA   -      C   --     G   ------C   U  UA |
Stem-loop sequence | AAAAUUGAGUCUCAAAAUUGAGUUGCUAGCAUUUUUCCUCCCCGUUAUUAUGCUGGGCAUGGUGGUAUCACAUUUUGGACAUUGAAUUUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518766.3 |
|
2.5 | PREDICTED: Glycine max peroxidase 11-like (LOC100780750), transcript variant X1, mRNA | peroxidase 11-like(LOC100780750) | coding protein | psRNATarget | |||||||||
XM_014775167.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC106798569 (LOC106798569), mRNA | uncharacterized LOC106798569(LOC106798569) | coding protein | psRNATarget |