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BaseInfo

ncRNA ID novel_gma_miR3323
Species Glycine max
Class miRNA
Genome position Chr2:8394642-8394733 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 73 - UUUUGGACAUUGAAUUUUGU - 92
Stem-loop(if miRNA) --      G --   U      -   GU     G   UUUUCCU   C  UA
  AAAAUU A  GUC CAAAAU UGA  UGCUA CAU       CCC GU  U
  |||||| |  ||| |||||| |||  ||||| |||       ||| ||
  UUUUAA U  CAG GUUUUA ACU  AUGGU GUA       GGG CG  U
UG      G UA   -      C   --     G   ------C   U  UA
Stem-loop sequence AAAAUUGAGUCUCAAAAUUGAGUUGCUAGCAUUUUUCCUCCCCGUUAUUAUGCUGGGCAUGGUGGUAUCACAUUUUGGACAUUGAAUUUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518766.3
ncRNA:20   UGUUUUAAGUUACAGGUUUU   1
  **|||||||*||||||||||
targets:1090   UGAAAAUUCCAUGUCCAAAA   1109

2.5 PREDICTED: Glycine max peroxidase 11-like (LOC100780750), transcript variant X1, mRNA peroxidase 11-like(LOC100780750) coding protein psRNATarget
XM_014775167.1
ncRNA:20   UGUUUUAAGUUACAGGUUUU   1
  =||||=*||||||||||||=
targets:1517   GCAAAGGUCAAUGUCCAAAG   1536

3.0 PREDICTED: Glycine max uncharacterized LOC106798569 (LOC106798569), mRNA uncharacterized LOC106798569(LOC106798569) coding protein psRNATarget