ncRNA ID | novel_gma_miR3319 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:36285872-36286052 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 162 - AUGUUAAUUGUCUUUUAUUA - 181 |
Stem-loop(if miRNA) |
--               UAU          A           UACUU     CA   UGU             -AUU    U       A  AA   AUGUUAAUUGUCUUU   UAAAUUUGUU AAAUUUUGGUA     CAUUU  CUU   UCUCCGAGUGCAU    UGAA GUGGUGG CG  G   |||||||||||||||   |||||||||| |||||||||||     |||||  |||   |||||||||||||    |||| ||||||| ||   UACAAUUAACAGAAA   AUUUAAACAA UUUAAAACCGU     GUAAA  GGA   AGGGGUUCAUGUA    ACUU CACCACC GU  A UU               -UU          C           ----C     AC   UUC             CUCU    U       -  AC |
Stem-loop sequence | AUGUUAAUUGUCUUUUAUUAAAUUUGUUAAAAUUUUGGUAUACUUCAUUUCACUUUGUUCUCCGAGUGCAUAUUUGAAUGUGGUGGACGAAGACAUGCCACCACUUUCAUCUCAUGUACUUGGGGACUUAGGCAAAAUGCUGCCAAAAUUUCAACAAAUUUAUUAAAGACAAUUAACAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT099497.1 |
|
2.5 | Soybean clone JCVI-FLGm-23P24 unknown mRNA | NA | coding protein | psRNATarget |