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BaseInfo

ncRNA ID	novel_gma_miR3317
Species	Glycine max
Class	miRNA
Genome position	Chr2:359929-360003 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451672;SRR1451676
Length	20
Mature sequence(if miRNA)	56 - GAAUGAAUUGCUGUUUUCUG - 75
Stem-loop(if miRNA)	--            -A   G  --  GAAAUGGGUACAU   GAAAAUGGCAAU  AUU AC  CA             A   ||||||||||||  ||| ||  ||   CUUUUGUCGUUA  UAA UG  CC             C GU            AG   G  CU  GUGAUGUAAACAA
Stem-loop sequence	GAAAAUGGCAAUAAUUGACCAGAAAUGGGUACAUACAACAAAUGUAGUGCCUCGUGAAUGAAUUGCUGUUUUCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK244448.1	ncRNA:20   GUCUUUUGUCGUUAAGUAAG   1   *||||||||||=|||||||= targets:548   GAGAAAACAGCGAUUCAUUU   567 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-03-E18	NA	coding protein	psRNATarget
XM_006598595.2	ncRNA:20   GUCUUUUGUCGUUAAGUAAG   1   *||||||||||=|||||||= targets:647   GAGAAAACAGCGAUUCAUUU   666 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100787464 (LOC100787464), mRNA	uncharacterized LOC100787464(LOC100787464)	coding protein	psRNATarget
XM_006585286.2	ncRNA:20   GUCUUUUGUCGUUAAGUAAG   1   *||||||||||*|||||||= targets:599   GAGAAAACAGCUAUUCAUUU   618 Target Full Sequence	2.5	PREDICTED: Glycine max nucleolin 2 (LOC100817963), transcript variant X2, mRNA	nucleolin 2(LOC100817963)	coding protein	psRNATarget
XM_006585285.2	ncRNA:20   GUCUUUUGUCGUUAAGUAAG   1   *||||||||||*|||||||= targets:596   GAGAAAACAGCUAUUCAUUU   615 Target Full Sequence	2.5	PREDICTED: Glycine max nucleolin 2 (LOC100817963), transcript variant X1, mRNA	nucleolin 2(LOC100817963)	coding protein	psRNATarget
XM_003521108.3	ncRNA:20   GUCUUUUGUCGUUAAGUAAG   1   =|*|||=||||||||||||* targets:874   UAAAAAGCAGCAAUUCAUUG   893 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100793897 (LOC100793897), transcript variant X1, mRNA	uncharacterized LOC100793897(LOC100793897)	coding protein	psRNATarget