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BaseInfo

ncRNA ID	novel_gma_miR3308
Species	Glycine max
Class	miRNA
Genome position	Chr20:34955000-34955128 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - AUGAAGAUUUUGAAUUAAAA - 20
Stem-loop(if miRNA)	--      UG   C   G  U              CUUC  UUUAUUAUAUUCUAUCAAAUAUU   UUAAUU  AAA UUU AU UUAAUUUAUUUUUA    AU                       G   ||||||  ||| ||| || ||||||||||||||    ||                       U   AAUUAA  UUU GAA UA AAUUAAAUAAAAAU    AA                       C AA      GU   A   G  C              AAAA  GGUGGGAUAACUUACUUGGGAAU
Stem-loop sequence	UUAAUUUGAAACUUUGAUUUUAAUUUAUUUUUACUUCAUUUUAUUAUAUUCUAUCAAAUAUUGUCUAAGGGUUCAUUCAAUAGGGUGGAAAAAAUAAAAAUAAAUUAACAUGAAGAUUUUGAAUUAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014773669.1	ncRNA:20   AAAAUUAAGUUUUAGAAGUA   1   ||||*|||||||*||||||| targets:936   UUUUCAUUCAAACUCUUCAU   955 Target Full Sequence	2.5	PREDICTED: Glycine max annexin A7-like (LOC100815897), transcript variant X2, mRNA	annexin A7-like(LOC100815897)	coding protein	psRNATarget
XM_003547226.3	ncRNA:20   AAAAUUAAGUUUUAGAAGUA   1   *|||==|||||||||||||* targets:505   GUUUGGUUCAAAAUCUUCAA   524 Target Full Sequence	3.0	PREDICTED: Glycine max EH domain-containing protein 1-like (LOC100805498), mRNA	EH domain-containing protein 1-like(LOC100805498)	coding protein	psRNATarget
XM_006586701.2	ncRNA:20   AAAAUUAAGUUUUAGAAGUA   1   *|||==|||||||||||||* targets:637   GUUUGGUUCAAAAUCUUCAA   656 Target Full Sequence	3.0	PREDICTED: Glycine max EH domain-containing protein 1-like (LOC100809091), mRNA	EH domain-containing protein 1-like(LOC100809091)	coding protein	psRNATarget
XM_014776575.1	ncRNA:20   AAAAUUAAGUUUUAGAAGUA   1   ***||||||||||||||||* targets:1773   GGAUAAUUCAAAAUCUUCAG   1792 Target Full Sequence	3.0	PREDICTED: Glycine max formin-like protein 20 (LOC100779085), transcript variant X4, mRNA	formin-like protein 20(LOC100779085)	coding protein	psRNATarget
XM_006581915.2	ncRNA:20   AAAAUUAAGUUUUAGAAGUA   1   ***||||||||||||||||* targets:1773   GGAUAAUUCAAAAUCUUCAG   1792 Target Full Sequence	3.0	PREDICTED: Glycine max formin-like protein 20 (LOC100779085), transcript variant X2, mRNA	formin-like protein 20(LOC100779085)	coding protein	psRNATarget
XM_003528154.3	ncRNA:20   AAAAUUAAGUUUUAGAAGUA   1   ***||||||||||||||||* targets:1988   GGAUAAUUCAAAAUCUUCAG   2007 Target Full Sequence	3.0	PREDICTED: Glycine max formin-like protein 20 (LOC100779085), transcript variant X1, mRNA	formin-like protein 20(LOC100779085)	coding protein	psRNATarget