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BaseInfo

ncRNA ID	novel_gma_miR3306
Species	Glycine max
Class	miRNA
Genome position	Chr19:26217306-26217363 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - AACUGAAUAUAUAUAUAUAU - 20
Stem-loop(if miRNA)	--AACU                      A       GAAUAUAUAUAUAUAUAUAUAU U       ||||||||||||||||||||||       UUUGUAUAUAUAUAUAUAUAUA A AUUUCC                      U
Stem-loop sequence	AACUGAAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUGUUUCCUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003518534.3	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   |||||||||||||||=|||| targets:1834   AUAUAUAUAUAUAUUUAGUU   1853 Target Full Sequence	1.5	PREDICTED: Glycine max putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 (LOC100788937), mRNA	putative UDP-glucose flavonoid 3-O-glucosyltransferase 3(LOC100788937)	coding protein	psRNATarget
XM_006573539.2	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||*||||| targets:1855   AUAUAUAUAUAUAUGCAGUU   1874 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0496 protein At2g18630-like (LOC102667785), transcript variant X1, mRNA	UPF0496 protein At2g18630-like(LOC102667785)	coding protein	psRNATarget
XM_014777566.1	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||||*||| targets:970   AUAUAUAUAUAUAUUCUGUU   989 Target Full Sequence	1.5	PREDICTED: Glycine max protein PLANT CADMIUM RESISTANCE 2-like (LOC100818282), mRNA	protein PLANT CADMIUM RESISTANCE 2-like(LOC100818282)	coding protein	psRNATarget
XM_014763778.1	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   **=||||||||||||||||| targets:835   UGGUAUAUAUAUAUUCAGUU   854 Target Full Sequence	2.0	PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC102669254), mRNA	methyl-CpG-binding domain-containing protein 13-like(LOC102669254)	coding protein	psRNATarget
XM_003522444.3	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||||||** targets:1420   AUAUAUAUAUAUAUUCAGGA   1439 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor HEC3-like (LOC100779374), mRNA	transcription factor HEC3-like(LOC100779374)	coding protein	psRNATarget
XM_003551157.3	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   |||||||||||||||||*|* targets:3251   AUAUAUAUAUAUAUUCAAUG   3270 Target Full Sequence	2.5	PREDICTED: Glycine max phagocyte signaling-impaired protein-like (LOC100800201), mRNA	phagocyte signaling-impaired protein-like(LOC100800201)	coding protein	psRNATarget
XM_014763862.1	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||*||||* targets:2788   AUAUAUAUAUAUAUACAGUA   2807 Target Full Sequence	2.5	PREDICTED: Glycine max BEL1-like homeodomain protein 4 (LOC100777243), transcript variant X2, mRNA	BEL1-like homeodomain protein 4(LOC100777243)	coding protein	psRNATarget
AK244160.1	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||*||||* targets:2705   AUAUAUAUAUAUAUACAGUA   2724 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-02-E02	NA	coding protein	psRNATarget
XM_003538782.3	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||*||||* targets:2724   AUAUAUAUAUAUAUACAGUA   2743 Target Full Sequence	2.5	PREDICTED: Glycine max BEL1-like homeodomain protein 4 (LOC100777243), transcript variant X1, mRNA	BEL1-like homeodomain protein 4(LOC100777243)	coding protein	psRNATarget
XM_003524158.3	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||*||||* targets:365   AUAUAUAUAUAUAUGCAGUG   384 Target Full Sequence	2.5	PREDICTED: Glycine max two-component response regulator ORR24-like (LOC100808625), mRNA	two-component response regulator ORR24-like(LOC100808625)	coding protein	psRNATarget
XM_003556945.3	ncRNA:20   UAUAUAUAUAUAUAAGUCAA   1   ||||||||||||||*||||* targets:1180   AUAUAUAUAUAUAUACAGUC   1199 Target Full Sequence	2.5	PREDICTED: Glycine max senescence-specific cysteine protease SAG39-like (LOC100781906), mRNA	senescence-specific cysteine protease SAG39-like(LOC100781906)	coding protein	psRNATarget
XM_003516766.3	ncRNA:20   UAUAUAUAUAUAUA-AGUCAA   1   ||||||||||||||-|||||| targets:1050   AUAUAUAUAUAUAUAUCAGUU   1070 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100802495 (LOC100802495), mRNA	uncharacterized LOC100802495(LOC100802495)	coding protein	psRNATarget