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BaseInfo

ncRNA ID	novel_gma_miR3301
Species	Glycine max
Class	miRNA
Genome position	Chr11:33940950-33941003 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	19
Mature sequence(if miRNA)	36 - AUUAUGCAGAUUACCGAGA - 54
Stem-loop(if miRNA)	-    --U    UA   UGAUCUUCAAU  UUCG   AUCU  UAU           A  ||||   ||||  |||  GAGC   UAGA  GUA           C A    CAU    -C   UUAUUUACAAA
Stem-loop sequence	UUCGUAUCUUAUAUUGAUCUUCAAUACAAACAUUUAUUAUGCAGAUUACCGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764271.1	ncRNA:19   AGAGCCAUUAGACGUAUUA   1   ||||||||||||||||||| targets:377   UCUCGGUAAUCUGCAUAAU   395 Target Full Sequence	0.0	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g67720 (LOC100798488), transcript variant X2, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g67720(LOC100798488)	coding protein	psRNATarget
XM_014768543.1	ncRNA:19   AGAGCCAUUAGACGUAUUA   1   ||||||||||=|||||||| targets:2156   UCUCGGUAAUUUGCAUAAU   2174 Target Full Sequence	1.5	PREDICTED: Glycine max protein DETOXIFICATION 49-like (LOC100787316), mRNA	protein DETOXIFICATION 49-like(LOC100787316)	coding protein	psRNATarget
XM_003521825.3	ncRNA:19   AGAGCCAUUAGACGUAUUA   1   |=|||||||||||*||||| targets:1970   UUUCGGUAAUCUGGAUAAU   1988 Target Full Sequence	2.5	PREDICTED: Glycine max probable arabinosyltransferase ARAD1 (LOC100819640), mRNA	probable arabinosyltransferase ARAD1(LOC100819640)	coding protein	psRNATarget
XM_014771118.1	ncRNA:19   AGAGCCAUUAGACGUAUUA   1   |||||*||||||||*|||| targets:229   UCUCGUUAAUCUGCUUAAU   247 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase WNK4 (LOC100778102), transcript variant X2, mRNA	probable serine/threonine-protein kinase WNK4(LOC100778102)	coding protein	psRNATarget