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BaseInfo

ncRNA ID novel_gma_miR3297
Species Glycine max
Class miRNA
Genome position Chr18:39304592-39304670 [-]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 21
Mature sequence(if miRNA) 59 - UGUAAUGGAUGAAGCAGCUGA - 79
Stem-loop(if miRNA) ----UG      A  AA     U A      UU       UC
      UAAUGG UG  GCAGC G GUGUGC  GGUUCUG  A
      |||||| ||  ||||| | ||||||  |||||||  G
      GUUACC AC  UGUUG C CGUAUG  CUAAGGU  G
GGACAU      -  --     U C      -U       UG
Stem-loop sequence UGUAAUGGAUGAAGCAGCUGAGUGUGCUUGGUUCUGUCAGGGUUGGAAUCUGUAUGCCCUGUUGUCACCAUUGUACAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003551444.2
ncRNA:21   AGUCGACGAAGUAGGUAAUGU   1
  *|||*|||||||||||||*||
targets:968   GCAGAUGCUUCAUCCAUUCCA   988

2.5 PREDICTED: Glycine max uncharacterized LOC100814816 (LOC100814816), mRNA uncharacterized LOC100814816(LOC100814816) coding protein psRNATarget