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BaseInfo

ncRNA ID	novel_gma_miR3295
Species	Glycine max
Class	miRNA
Genome position	Chr18:46546041-46546125 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	1 - UUAUGAAAAUAAAAAAUAAA - 20
Stem-loop(if miRNA)	--       A       A  CU     A       CGUAAAC   UAUUUUU AUUUUUA AA  UUUUA AUAACAC       A   ||||||| ||||||| ||  ||||| |||||||       A   AUAAAAA UAAAAGU UU  AAAAU UAUUGUG       U AA       A       A  AC     A       UAAAAAA
Stem-loop sequence	UAUUUUUAAUUUUUAAAACUUUUUAAAUAACACCGUAAACAAUAAAAAAUGUGUUAUAUAAAACAUUAUGAAAAUAAAAAAUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006577869.2	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   *||||||||||||||=|||| targets:16   GUUAUUUUUUAUUUUUAUAA   35 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100811115 (LOC100811115), mRNA	uncharacterized LOC100811115(LOC100811115)	coding protein	psRNATarget
XM_006602029.1	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   *||||||||||*|||||||| targets:2207   AUUAUUUUUUAAUUUCAUAA   2226 Target Full Sequence	1.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 66-like (LOC100787878), transcript variant X1, mRNA	zinc finger CCCH domain-containing protein 66-like(LOC100787878)	coding protein	psRNATarget
XM_006602030.1	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   *||||||||||*|||||||| targets:2202   AUUAUUUUUUAAUUUCAUAA   2221 Target Full Sequence	1.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 66-like (LOC100787878), transcript variant X2, mRNA	zinc finger CCCH domain-containing protein 66-like(LOC100787878)	coding protein	psRNATarget
XM_003551224.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   *||||||||||*|||||||| targets:2200   AUUAUUUUUUAAUUUCAUAA   2219 Target Full Sequence	1.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 66-like (LOC100787878), transcript variant X3, mRNA	zinc finger CCCH domain-containing protein 66-like(LOC100787878)	coding protein	psRNATarget
XM_003539282.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   *||||||||||*|||||||| targets:2131   GUUAUUUUUUAAUUUCAUAA   2150 Target Full Sequence	1.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 66-like (LOC100806121), mRNA	zinc finger CCCH domain-containing protein 66-like(LOC100806121)	coding protein	psRNATarget
XM_003518555.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   ||||*||||||||||||||* targets:1039   UUUAAUUUUUAUUUUCAUAU   1058 Target Full Sequence	2.0	PREDICTED: Glycine max vacuolar iron transporter homolog 3-like (LOC100802179), mRNA	vacuolar iron transporter homolog 3-like(LOC100802179)	coding protein	psRNATarget
XM_003534506.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   ***||||||||||||||||| targets:75   ACCAUUUUUUAUUUUCAUAA   94 Target Full Sequence	2.0	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100805894), transcript variant X1, mRNA	ATP-dependent helicase BRM-like(LOC100805894)	coding protein	psRNATarget
XM_003543169.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   |||||||||||||||=|||* targets:1629   UUUAUUUUUUAUUUUUAUAU   1648 Target Full Sequence	2.5	PREDICTED: Glycine max protein DJ-1 homolog B-like (LOC100807226), mRNA	protein DJ-1 homolog B-like(LOC100807226)	coding protein	psRNATarget
XM_003530846.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   ||||||||||||||||||** targets:1873   UUUAUUUUUUAUUUUCAUUU   1892 Target Full Sequence	2.5	PREDICTED: Glycine max laccase-17-like (LOC100795932), mRNA	laccase-17-like(LOC100795932)	coding protein	psRNATarget
XM_003525960.3	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   ||||*|||||=||||||||| targets:1063   UUUAGUUUUUGUUUUCAUAA   1082 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100775320 (LOC100775320), mRNA	uncharacterized LOC100775320(LOC100775320)	coding protein	psRNATarget
BT097711.1	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   ||||||||||||*||||||= targets:1036   UUUAUUUUUUAUCUUCAUAG   1055 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22O4 unknown mRNA	NA	coding protein	psRNATarget
NM_001317467.1	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   ||||||||||||*||||||= targets:1033   UUUAUUUUUUAUCUUCAUAG   1052 Target Full Sequence	2.5	Glycine max transcription factor HEC1-like (LOC100805427), mRNA	transcription factor HEC1-like(LOC100805427)	coding protein	psRNATarget
BT095122.1	ncRNA:20   AAAUAAAAAAUAAAAGUAUU   1   |||*|||||||||||=|||| targets:6   UUUUUUUUUUAUUUUUAUAA   25 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-6D20 unknown mRNA	NA	coding protein	psRNATarget