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BaseInfo

ncRNA ID novel_gma_miR3294
Species Glycine max
Class miRNA
Genome position Chr18:52356747-52356806 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 22
Mature sequence(if miRNA) 1 - CUUUAGUUUGAACUCAACGCCA - 22
Stem-loop(if miRNA) --  U       AAC       --   UUUU
  CU UAGUUUG   UCAACGC  CAG    G
  || |||||||   |||||||  |||    U
  GG AUCGGAU   GGUUGUG  GUU    A
UA  U       -GA       UU   UACG
Stem-loop sequence CUUUAGUUUGAACUCAACGCCAGUUUUGUAGCAUUUGUUGUGUUGGAGUAGGCUAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586759.2
ncRNA:22   ACCGCAACUCAAGUUUGAUUUC   1
  |**|||||||||||||*||||*
targets:4089   UUCCGUUGAGUUCAAAGUAAAU   4110

2.5 PREDICTED: Glycine max disease resistance protein RGA2-like (LOC102666690), transcript variant X1, mRNA disease resistance protein RGA2-like(LOC102666690) coding protein psRNATarget
XM_006586760.2
ncRNA:22   ACCGCAACUCAAGUUUGAUUUC   1
  |**|||||||||||||*||||*
targets:4199   UUCCGUUGAGUUCAAAGUAAAU   4220

2.5 PREDICTED: Glycine max disease resistance protein RGA2-like (LOC102666690), transcript variant X2, mRNA disease resistance protein RGA2-like(LOC102666690) coding protein psRNATarget