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BaseInfo

ncRNA ID	novel_gma_miR3289
Species	Glycine max
Class	miRNA
Genome position	Chr17:23744936-23745016 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451672
Length	20
Mature sequence(if miRNA)	62 - AGUUUCUCUAGAAUUUUUGU - 81
Stem-loop(if miRNA)	--U          -  UU  CAU     AGC     UU   C    GAAAUUUUGG GA  CU   UUGUU   UGCUU  AUU U    |||||||||| ||  ||   |||||   |||||  ||| U    UUUUAAGAUC CU  GA   AGCAG   AUGAG  UAA U UGU          U  UU  -UU     --A     UU   U
Stem-loop sequence	UGAAAUUUUGGGAUUCUCAUUUGUUAGCUGCUUUUAUUCUUUUAAUUUGAGUAAGACGAUUAGUUUCUCUAGAAUUUUUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003546956.3	ncRNA:20   UGUUUUUAAGAUCUCUUUGA   1   =*||||||||*||||||||| targets:2872   GAAAAAAUUCGAGAGAAACU   2891 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100818834 (LOC100818834), transcript variant X2, mRNA	uncharacterized LOC100818834(LOC100818834)	coding protein	psRNATarget
XM_006594976.2	ncRNA:20   UGUUUUUAAGAUCUCUUUGA   1   =*||||||||*||||||||| targets:3202   GAAAAAAUUCGAGAGAAACU   3221 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798889 (LOC100798889), transcript variant X1, mRNA	uncharacterized LOC100798889(LOC100798889)	coding protein	psRNATarget
XM_003541996.3	ncRNA:20   UGUUUUUAAGAUCUCUUUGA   1   =*||||||||*||||||||| targets:3303   GAAAAAAUUCGAGAGAAACU   3322 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798889 (LOC100798889), transcript variant X2, mRNA	uncharacterized LOC100798889(LOC100798889)	coding protein	psRNATarget
XM_006597199.2	ncRNA:20   UGUUUUUAAGAUCUCUUUGA   1   =*||||||||*||||||||| targets:3411   GAAAAAAUUCGAGAGAAACU   3430 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100818834 (LOC100818834), transcript variant X1, mRNA	uncharacterized LOC100818834(LOC100818834)	coding protein	psRNATarget