ncRNA ID | novel_gma_miR3278 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:13808570-13808644 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451672 |
Length | 20 |
Mature sequence(if miRNA) | 56 - CGUAUGUUUUGAACUUUUUU - 75 |
Stem-loop(if miRNA) |
--    A           A     A     C         AAAA UUCAAAACAUA GGAUU AUAAU UGUAUGG   |||| ||||||||||| ||||| ||||| ||||||U   UUUU AAGUUUUGUAU CCUAA UGUUA GCAUACU UU    C           G     C     A       |
Stem-loop sequence | AAAAAUUCAAAACAUAAGGAUUAAUAAUCUGUAUGGUUCAUACGAAUUGUCAAUCCGUAUGUUUUGAACUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014777849.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100817049 (LOC100817049), transcript variant X2, mRNA | uncharacterized LOC100817049(LOC100817049) | coding protein | psRNATarget | |||||||||
XM_003528841.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100817049 (LOC100817049), transcript variant X1, mRNA | uncharacterized LOC100817049(LOC100817049) | coding protein | psRNATarget |