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BaseInfo

ncRNA ID novel_gma_miR3278
Species Glycine max
Class miRNA
Genome position Chr14:13808570-13808644 [+]
Reference genome Glycine_max_v2.0
Source SRR1451672
Length 20
Mature sequence(if miRNA) 56 - CGUAUGUUUUGAACUUUUUU - 75
Stem-loop(if miRNA) --    A           A     A     C      
  AAAA UUCAAAACAUA GGAUU AUAAU UGUAUGG
  |||| ||||||||||| ||||| ||||| ||||||U
  UUUU AAGUUUUGUAU CCUAA UGUUA GCAUACU
UU    C           G     C     A      
Stem-loop sequence AAAAAUUCAAAACAUAAGGAUUAAUAAUCUGUAUGGUUCAUACGAAUUGUCAAUCCGUAUGUUUUGAACUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777849.1
ncRNA:20   UUUUUUCAAGUUUUGUAUGC   1
  =*|||||||||||||||*||
targets:2391   GUAAAAGUUCAAAACAUCCG   2410

2.5 PREDICTED: Glycine max uncharacterized LOC100817049 (LOC100817049), transcript variant X2, mRNA uncharacterized LOC100817049(LOC100817049) coding protein psRNATarget
XM_003528841.3
ncRNA:20   UUUUUUCAAGUUUUGUAUGC   1
  =*|||||||||||||||*||
targets:2391   GUAAAAGUUCAAAACAUCCG   2410

2.5 PREDICTED: Glycine max uncharacterized LOC100817049 (LOC100817049), transcript variant X1, mRNA uncharacterized LOC100817049(LOC100817049) coding protein psRNATarget