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BaseInfo

ncRNA ID novel_gma_miR3263
Species Glycine max
Class miRNA
Genome position Chr12:35388088-35388152 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - UUCAUGGUCAUCUUUGUUGUU - 21
Stem-loop(if miRNA) --G  UG       GG      GU   G UUGU
   AG  GAGAUGA  CAUGAA  CAA G    A
   ||  |||||||  ||||||  ||| |
   UU  UUCUACU  GUACUU  GUU U    U
UUG  GU       -G      GU   G UGUA
Stem-loop sequence GAGUGGAGAUGAGGCAUGAAGUCAAGGUUGUAUAUGUUGUUGUGUUCAUGGUCAUCUUUGUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556713.3
ncRNA:21   UUGUUGUUUCUACUGGUACUU   1
  **||*||||||||||||||||
targets:1133   CUCACCAAAGAUGACCAUGAA   1153

1.0 PREDICTED: Glycine max NAD(P)H-dependent 6'-deoxychalcone synthase (LOC100790074), mRNA NAD(P)H-dependent 6'-deoxychalcone synthase(LOC100790074) coding protein psRNATarget
XM_003537036.1
ncRNA:21   UUGUUGUUUCUACUGGUACUU   1
  ==|||||||||||||=||||*
targets:697   GGCAACAAAGAUGACUAUGAU   717

2.5 PREDICTED: Glycine max GDSL esterase/lipase At5g45910-like (LOC100798119), mRNA GDSL esterase/lipase At5g45910-like(LOC100798119) coding protein psRNATarget