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BaseInfo

ncRNA ID novel_gma_miR3243
Species Glycine max
Class miRNA
Genome position Chr8:18692751-18692896 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - UCCAAUAAGAACAUGACACGU - 21
Stem-loop(if miRNA) --      C   G                            A    A    AUCA   AA   AA  A  C UUU
  GUGUCA GUU UUAUUGGAUGAUGACUGUCACGUGUCAU UUCU AUUG    AUG  AAC  CA UG A   U
  |||||| ||| |||||||||||||||||||||||||||| |||| ||||    |||  |||  || || |
  CACAGU CAA AAUAACCUACUACUGACAGUGCACAGUA AAGA UAAC    UAC  UUG  GU AC U   A
UG      A   G                            C    C    ---C   AG   AG  -  U UCU
Stem-loop sequence GUGUCACGUUGUUAUUGGAUGAUGACUGUCACGUGUCAUAUUCUAAUUGAUCAAUGAAAACAACAAUGCAUUUUAUCUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACACGUGACAGUCAUCAUCCAAUAAGAACAUGACACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533235.3
ncRNA:21   UGCACAGUACAAGAAUAACCU   1
  **|*||||*||||||||||||
targets:2895   UGGCGUCACGUUCUUAUUGGA   2915

2.5 PREDICTED: Glycine max receptor-like protein kinase HSL1 (LOC100789972), mRNA receptor-like protein kinase HSL1(LOC100789972) coding protein psRNATarget