ncRNA ID | novel_gma_miR3243 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:18692751-18692896 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCAAUAAGAACAUGACACGU - 21 |
Stem-loop(if miRNA) |
--      C   G                            A    A    AUCA   AA   AA  A  C UUU   GUGUCA GUU UUAUUGGAUGAUGACUGUCACGUGUCAU UUCU AUUG    AUG  AAC  CA UG A   U   |||||| ||| |||||||||||||||||||||||||||| |||| ||||    |||  |||  || || |   CACAGU CAA AAUAACCUACUACUGACAGUGCACAGUA AAGA UAAC    UAC  UUG  GU AC U   A UG      A   G                            C    C    ---C   AG   AG  -  U UCU |
Stem-loop sequence | GUGUCACGUUGUUAUUGGAUGAUGACUGUCACGUGUCAUAUUCUAAUUGAUCAAUGAAAACAACAAUGCAUUUUAUCUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACACGUGACAGUCAUCAUCCAAUAAGAACAUGACACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003533235.3 |
|
2.5 | PREDICTED: Glycine max receptor-like protein kinase HSL1 (LOC100789972), mRNA | receptor-like protein kinase HSL1(LOC100789972) | coding protein | psRNATarget |