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BaseInfo

ncRNA ID	novel_gma_miR3238
Species	Glycine max
Class	miRNA
Genome position	Chr8:17236522-17236562 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670;SRR1451672;SRR1451674;SRR1451676
Length	20
Mature sequence(if miRNA)	1 - UUUUGCUGUUAUAAGAACUU - 20
Stem-loop(if miRNA)	--     C   -U      AC   UUUUG UGU  AUAAGA  U   ||||| |||  ||||||  U   AAAAU ACA  UAUUCU  U AA     -   UC      CU
Stem-loop sequence	UUUUGCUGUUAUAAGAACUUUUCUCUUAUCUACAUAAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT099259.1	ncRNA:20   UUCAAGAAUAUUGUCGUUUU   1   |||||||||||||||||||| targets:137   AAGUUCUUAUAACAGCAAAA   156 Target Full Sequence	0.0	Soybean clone JCVI-FLGm-26J24 unknown mRNA	NA	coding protein	psRNATarget
NM_001253998.2	ncRNA:20   UUCAAGAAUAUUGUCGUUUU   1   ||*|||||*||||||||||| targets:814   AAAUUCUUUUAACAGCAAAA   833 Target Full Sequence	2.5	Glycine max uncharacterized LOC100818051 (LOC100818051), mRNA	uncharacterized LOC100818051(LOC100818051)	coding protein	psRNATarget
BT097729.1	ncRNA:20   UUCAAGAAUAUUGUCGUUUU   1   ||*|||||*||||||||||| targets:816   AAAUUCUUUUAACAGCAAAA   835 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22B1 unknown mRNA	NA	coding protein	psRNATarget
XM_006588483.2	ncRNA:20   UUCAAGAAUAUUGUCGUUUU   1   *|||||*|||||*||||||| targets:1510   CAGUUCAUAUAAAAGCAAAA   1529 Target Full Sequence	2.5	PREDICTED: Glycine max nucleolar protein 14-like (LOC100802524), mRNA	nucleolar protein 14-like(LOC100802524)	coding protein	psRNATarget
BT093207.1	ncRNA:20   UUCAAGAAUA-UUGUCGUUUU   1   *|||||||||-|||||||||| targets:283   CAGUUCUUAUCAACAGCAAAA   303 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-17A15 unknown mRNA	NA	coding protein	psRNATarget
XM_014763968.1	ncRNA:20   UUCAAGAAUA-UUGUCGUUUU   1   *|||||||||-|||||||||| targets:335   CAGUUCUUAUCAACAGCAAAA   355 Target Full Sequence	3.0	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 16 (LOC100782777), transcript variant X2, mRNA	zinc finger CCCH domain-containing protein 16(LOC100782777)	coding protein	psRNATarget
XM_006590795.2	ncRNA:20   UUCAAGAAUA-UUGUCGUUUU   1   *|||||||||-|||||||||| targets:332   CAGUUCUUAUCAACAGCAAAA   352 Target Full Sequence	3.0	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 16 (LOC100782777), transcript variant X1, mRNA	zinc finger CCCH domain-containing protein 16(LOC100782777)	coding protein	psRNATarget