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BaseInfo

ncRNA ID	novel_gma_miR3236
Species	Glycine max
Class	miRNA
Genome position	Chr7:10193875-10193966 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	73 - GUGUCCGGUGUCUGUGUCAG - 92
Stem-loop(if miRNA)	--    -        -    U    A  AAAUCA     C    AA   U   GACA AGACACCG AUAC GACA GU      ACAUC CAUU  CUU U   |||| |||||||| |||| |||| ||      ||||| ||||  |||   CUGU UCUGUGGC UGUG UUGU CA      UGUGG GUGG  GAA U GA    G        C    -    G  ----CC     A    -A   U
Stem-loop sequence	GACAAGACACCGAUACUGACAAGUAAAUCAACAUCCCAUUAACUUUUUUAAGAGGUGAGGUGUCCACGUGUUGUGUCCGGUGUCUGUGUCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006583419.2	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   |*|||||||||||||||||| targets:1494   CAGACACAGACACCGGACAC   1513 Target Full Sequence	1.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 9 (LOC100798039), transcript variant X5, mRNA	type IV inositol polyphosphate 5-phosphatase 9(LOC100798039)	coding protein	psRNATarget
XM_006583418.2	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   |*|||||||||||||||||| targets:1498   CAGACACAGACACCGGACAC   1517 Target Full Sequence	1.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 9 (LOC100798039), transcript variant X4, mRNA	type IV inositol polyphosphate 5-phosphatase 9(LOC100798039)	coding protein	psRNATarget
XM_006583417.2	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   |*|||||||||||||||||| targets:1503   CAGACACAGACACCGGACAC   1522 Target Full Sequence	1.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 9 (LOC100798039), transcript variant X2, mRNA	type IV inositol polyphosphate 5-phosphatase 9(LOC100798039)	coding protein	psRNATarget
XM_006583416.2	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   |*|||||||||||||||||| targets:1507   CAGACACAGACACCGGACAC   1526 Target Full Sequence	1.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 9 (LOC100798039), transcript variant X3, mRNA	type IV inositol polyphosphate 5-phosphatase 9(LOC100798039)	coding protein	psRNATarget
XM_014777914.1	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   |*|||||||||||||||||| targets:1517   CAGACACAGACACCGGACAC   1536 Target Full Sequence	1.0	PREDICTED: Glycine max type IV inositol polyphosphate 5-phosphatase 9 (LOC100798039), transcript variant X1, mRNA	type IV inositol polyphosphate 5-phosphatase 9(LOC100798039)	coding protein	psRNATarget
XM_003532912.2	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   =||*|||||||||||||||* targets:538   UUGCCACAGACACCGGACAA   557 Target Full Sequence	2.0	PREDICTED: Glycine max monoacylglycerol lipase ABHD6-like (LOC100779824), mRNA	monoacylglycerol lipase ABHD6-like(LOC100779824)	coding protein	psRNATarget
XM_014774298.1	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   ||||||*=|||||||||||| targets:503   CUGACAAGGACACCGGACAC   522 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100784880 (LOC100784880), mRNA	uncharacterized LOC100784880(LOC100784880)	coding protein	psRNATarget
XM_006605697.2	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   |*|||||=|||||||||||| targets:2385   CCGACACGGACACCGGACAC   2404 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102669551 (LOC102669551), mRNA	uncharacterized LOC102669551(LOC102669551)	coding protein	psRNATarget
XM_003553922.3	ncRNA:20   GACUGUGUCUGUGGCCUGUG   1   ***|||*||||||||||||| targets:46   GCAACAGAGACACCGGACAC   65 Target Full Sequence	3.0	PREDICTED: Glycine max acyltransferase-like protein At3g26840, chloroplastic (LOC100811435), transcript variant X2, mRNA	acyltransferase-like protein At3g26840, chloroplastic(LOC100811435)	coding protein	psRNATarget