ncRNA ID | novel_gma_miR3235 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:6665396-6665496 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AAGAGUGUGUUUGGAUAGAG - 20 |
Stem-loop(if miRNA) |
----     U     UG     A        -          --AU     AU     AAGAG GUGUU  GAUAG GAAUUUUA AUUGAGAAAA    AAUUU  C     ||||| |||||  ||||| |||||||| ||||||||||    |||||     UUUUU UAUAG  CUGUU CUUAAAAU UAAUUUUUUU    UUAAG  A AGUA     U     GU     A        C          AAAU     AG |
Stem-loop sequence | AAGAGUGUGUUUGGAUAGAGAAUUUUAAUUGAGAAAAAUAAUUUAUCAGAGAAUUUAAAUUUUUUUAAUCUAAAAUUCAUUGUCUGGAUAUUUUUUUAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767860.1 |
|
2.5 | PREDICTED: Glycine max F-box protein At3g07870-like (LOC106796262), mRNA | F-box protein At3g07870-like(LOC106796262) | coding protein | psRNATarget |