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BaseInfo

ncRNA ID novel_gma_miR3235
Species Glycine max
Class miRNA
Genome position Chr7:6665396-6665496 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - AAGAGUGUGUUUGGAUAGAG - 20
Stem-loop(if miRNA) ----     U     UG     A        -          --AU     AU
    AAGAG GUGUU  GAUAG GAAUUUUA AUUGAGAAAA    AAUUU  C
    ||||| |||||  ||||| |||||||| ||||||||||    |||||
    UUUUU UAUAG  CUGUU CUUAAAAU UAAUUUUUUU    UUAAG  A
AGUA     U     GU     A        C          AAAU     AG
Stem-loop sequence AAGAGUGUGUUUGGAUAGAGAAUUUUAAUUGAGAAAAAUAAUUUAUCAGAGAAUUUAAAUUUUUUUAAUCUAAAAUUCAUUGUCUGGAUAUUUUUUUAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767860.1
ncRNA:20   GAGAUAGGUUUGUGUGAGAA   1
  ||||*|||||*|||||||||
targets:199   CUCUCUCCAACCACACUCUU   218

2.5 PREDICTED: Glycine max F-box protein At3g07870-like (LOC106796262), mRNA F-box protein At3g07870-like(LOC106796262) coding protein psRNATarget