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BaseInfo

ncRNA ID	novel_gma_miR3231
Species	Glycine max
Class	miRNA
Genome position	Chr7:8199450-8199541 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	73 - UUGUUGAUGAAAAAAAAAAA - 92
Stem-loop(if miRNA)	-- UG              AA   CAAC           GACAAAUUA   U  UUGAUGAAAAAAAA  AAU    AAUUGAUAUUU         U   |  ||||||||||||||  |||    |||||||||||   A  AACUAUUUUUUUUU  UUA    UUAACUAUAAA         G UU GU              CA   ----           AUUAUAUAA
Stem-loop sequence	UUGUUGAUGAAAAAAAAAAAAUCAACAAUUGAUAUUUGACAAAUUAUGAAUAUAUUAAAAUAUCAAUUAUUACUUUUUUUUUAUCAAUGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK246026.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   *|||||*||||||||||||| targets:327   AUUUUUGUUUUCAUCAACAA   346 Target Full Sequence	1.0	Glycine max cDNA, clone: GMFL01-48-P22	NA	coding protein	psRNATarget
BT092766.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   *|||||*||||||||||||| targets:369   AUUUUUGUUUUCAUCAACAA   388 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-11P17 unknown mRNA	NA	coding protein	psRNATarget
NM_001248216.2	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   *|||||*||||||||||||| targets:367   AUUUUUGUUUUCAUCAACAA   386 Target Full Sequence	1.0	Glycine max uncharacterized LOC100527884 (LOC100527884), mRNA	uncharacterized LOC100527884(LOC100527884)	coding protein	psRNATarget
BT099121.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   |||||||||||||||||=|| targets:13   UUUUUUUUUUUCAUCAAUAA   32 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-13B19 unknown mRNA	NA	coding protein	psRNATarget
XM_006596535.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   *||||||||||=|||||||= targets:126   CUUUUUUUUUUUAUCAACAG   145 Target Full Sequence	2.5	PREDICTED: Glycine max protein LATERAL ROOT PRIMORDIUM 1-like (LOC100817745), mRNA	protein LATERAL ROOT PRIMORDIUM 1-like(LOC100817745)	coding protein	psRNATarget
XM_014771455.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   **|||||||||=|||||||| targets:1099   ACUUUUUUUUUUAUCAACAA   1118 Target Full Sequence	2.5	PREDICTED: Glycine max ethylene-responsive transcription factor 1B-like (LOC100800600), mRNA	ethylene-responsive transcription factor 1B-like(LOC100800600)	coding protein	psRNATarget
BT099082.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   |||||||||||||||||*|= targets:10   UUUUUUUUUUUCAUCAAGAG   29 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-23J7 unknown mRNA	NA	coding protein	psRNATarget
BT099428.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   |||||||||||*|||||||= targets:6   UUUUUUUUUUUGAUCAACAG   25 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-23L18 unknown mRNA	NA	coding protein	psRNATarget
BT093905.1	ncRNA:20   AAAAAAAAAAAGUAGUUGUU   1   |*|||||||||=|||||||| targets:639   UCUUUUUUUUUUAUCAACAA   658 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-17N8 unknown mRNA	NA	coding protein	psRNATarget
BT094997.1	ncRNA:20   AAAAAAAAAAAGUAGUU-GUU   1   |||||||||||||||||-||| targets:6   UUUUUUUUUUUCAUCAAUCAA   26 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-6F9 unknown mRNA	NA	coding protein	psRNATarget