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BaseInfo

ncRNA ID	novel_gma_miR3230
Species	Glycine max
Class	miRNA
Genome position	Chr7:51751-51885 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670;SRR1451672
Length	20
Mature sequence(if miRNA)	1 - UGCUGCUUUUGUUUUUACUC - 20
Stem-loop(if miRNA)	--  CU     U         C     CU  -CC   -A        GACAA    -C      GG UAU   UG  GCUUU GUUUUUACU UGUUU  UG   UUC  AAGAUUUG     GAAA  AAUGAA  U   A   ||  ||||| ||||||||| |||||  ||   |||  ||||||||     ||||  ||||||  |   AC  UGGAA CAAAGAUGA ACGAA  AC   AAG  UUCUAAAC     CUUU  UUACUU  G   U UU  AG     -         A     -U  UAA   CA        ACAUC    UU      UU UUU
Stem-loop sequence	UGCUGCUUUUGUUUUUACUCUGUUUCUUGCCUUCAAAGAUUUGGACAAGAAACAAUGAAGGUUAUAUUUUGUUUUCAUUUUUUUCCUACACAAAUCUUACGAAAAUCAUAAGCAAAGUAGAAACAAGGUGACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006578414.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1861   CAGUACAAACAAAAGUAGCA   1880 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X2, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006578417.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1861   CAGUACAAACAAAAGUAGCA   1880 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X7, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006578415.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1861   CAGUACAAACAAAAGUAGCA   1880 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X4, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006578418.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1861   CAGUACAAACAAAAGUAGCA   1880 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X8, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006578420.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1804   CAGUACAAACAAAAGUAGCA   1823 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X10, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006591130.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1885   CAGUACAAACAAAAGUAGCA   1904 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800977 (LOC100800977), transcript variant X4, mRNA	uncharacterized LOC100800977(LOC100800977)	coding protein	psRNATarget
XM_006578419.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1857   CAGUACAAACAAAAGUAGCA   1876 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X9, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006578413.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1860   CAGUACAAACAAAAGUAGCA   1879 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X1, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006578416.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1861   CAGUACAAACAAAAGUAGCA   1880 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812174 (LOC100812174), transcript variant X3, mRNA	uncharacterized LOC100812174(LOC100812174)	coding protein	psRNATarget
XM_006591131.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1882   CAGUACAAACAAAAGUAGCA   1901 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800977 (LOC100800977), transcript variant X5, mRNA	uncharacterized LOC100800977(LOC100800977)	coding protein	psRNATarget
XM_006591128.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1885   CAGUACAAACAAAAGUAGCA   1904 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800977 (LOC100800977), transcript variant X1, mRNA	uncharacterized LOC100800977(LOC100800977)	coding protein	psRNATarget
XM_006591129.2	ncRNA:20   CUCAUUUUUGUUUUCGUCGU   1   *||||*|||||||||=|||| targets:1885   CAGUACAAACAAAAGUAGCA   1904 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800977 (LOC100800977), transcript variant X2, mRNA	uncharacterized LOC100800977(LOC100800977)	coding protein	psRNATarget
XM_006604911.1	ncRNA:20   CUCAU-UUUUGUUUUCGUCGU   1   *|||*-||||||||||||||| targets:202   AAGUCCAAAACAAAAGCAGCA   222 Target Full Sequence	3.0	PREDICTED: Glycine max late embryogenesis abundant protein 2-like (LOC100788282), mRNA	late embryogenesis abundant protein 2-like(LOC100788282)	coding protein	psRNATarget