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BaseInfo

ncRNA ID novel_gma_miR3226
Species Glycine max
Class miRNA
Genome position Chr7:1963310-1963353 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 25 - CAUUGGUUGUAGGGCCUGGA - 44
Stem-loop(if miRNA) -CA    --G        C GA
   AGGC   ACAGCCAG G  A
   ||||   |||||||| |  G
   UCCG   UGUUGGUU C  G
AGG    GGA        A AG
Stem-loop sequence CAAGGCGACAGCCAGCGGAAGGGACAUUGGUUGUAGGGCCUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778696.1
ncRNA:20   AGGUCCGGGAUGUUGGUUAC   1
  *=*||*||||||||||||||
targets:3409   GUAAGACCCUACAACCAAUG   3428

3.0 PREDICTED: Glycine max THO complex subunit 2-like (LOC100817413), transcript variant X2, mRNA THO complex subunit 2-like(LOC100817413) coding protein psRNATarget
XM_014778695.1
ncRNA:20   AGGUCCGGGAUGUUGGUUAC   1
  *=*||*||||||||||||||
targets:3409   GUAAGACCCUACAACCAAUG   3428

3.0 PREDICTED: Glycine max THO complex subunit 2-like (LOC100817413), transcript variant X1, mRNA THO complex subunit 2-like(LOC100817413) coding protein psRNATarget