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BaseInfo

ncRNA ID novel_gma_miR3225
Species Glycine max
Class miRNA
Genome position Chr7:35862169-35862228 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 40 - UUGGUUCAUUAACAAUCAUUA - 60
Stem-loop(if miRNA) --   UU      U        G   G  A
  AUG  UUGUUA UGAACCAA GUG AG A
  |||  |||||| |||||||| ||| || U
  UAC  AACAAU ACUUGGUU UAU UU U
AU   -U      U        G   G  G
Stem-loop sequence AUGUUUUGUUAUUGAACCAAGGUGGAGAAUUGUUGUAUGUUGGUUCAUUAACAAUCAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600552.2
ncRNA:21   AUUACUAACAAUUACUUGGUU   1
  *||||=|||*|||||||||||
targets:2234   AAAUGGUUGAUAAUGAACCAA   2254

2.5 PREDICTED: Glycine max uncharacterized LOC100816395 (LOC100816395), mRNA uncharacterized LOC100816395(LOC100816395) coding protein psRNATarget
XM_006581657.2
ncRNA:21   AUUACUAACAAUUACUUGGUU   1
  **||||||||||||||=|||*
targets:873   CUAUGAUUGUUAAUGAGCCAC   893

2.5 PREDICTED: Glycine max transcription factor MYB1R1-like (LOC102663307), mRNA transcription factor MYB1R1-like(LOC102663307) coding protein psRNATarget