Search result

BaseInfo

ncRNA ID novel_gma_miR3220
Species Glycine max
Class miRNA
Genome position Chr6:76277-76338 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 42 - GAGGGUUCUCCAAGUGCUUGG - 62
Stem-loop(if miRNA) --     G     -UUC          UCCAC
  AAGUG CUUGG    UUCUCUCUUG     U
  ||||| |||||    ||||||||||
  UUCGU GAACC    GGGAGGGAAU     A
GG     -     UCUU          UUUCA
Stem-loop sequence AAGUGGCUUGGUUCUUCUCUCUUGUCCACUAACUUUUAAGGGAGGGUUCUCCAAGUGCUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
Y10492.1
ncRNA:21   GGUUCGUGAACCUCUUGGGAG   1
  ||||*||||*|||||||||||
targets:1245   CCAAUCACUGGGAGAACCCUC   1265

2.5 G.max mRNA for putative cytochrome P450, clone CP5 NA coding protein psRNATarget
NM_001317523.2
ncRNA:21   GGUUCGUGAACCUCUUGGGAG   1
  ||||*||||*|||||||||||
targets:1326   CCAAUCACUGGGAGAACCCUC   1346

2.5 Glycine max cytochrome P450 93A3 (CYP93A3), mRNA cytochrome P450 93A3(LOC100815706) coding protein psRNATarget