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BaseInfo

ncRNA ID	novel_gma_miR3218
Species	Glycine max
Class	miRNA
Genome position	Chr6:8031240-8031292 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	34 - CCAAAUAAAACAAAACAAAA - 53
Stem-loop(if miRNA)	--       AAAC       AACCAA   CCAAAUA    AAAACAA      U   |||||||    |||||||      A   GGUUUAU    UUUUGUU      A UU       AAAU       AAUUAC
Stem-loop sequence	CCAAAUAAAACAAAACAAAACCAAUAACAUUAAUUGUUUUUAAAUAUUUGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003544401.3	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||||*||||||||||||| targets:105   UUUUGUGUUGUUUUAUUUGG   124 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100820584 (LOC100820584), transcript variant X2, mRNA	uncharacterized LOC100820584(LOC100820584)	coding protein	psRNATarget
XM_006573627.2	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||||||||||||||||** targets:65   UUUUGUUUUGUUUUAUUUUU   84 Target Full Sequence	2.5	PREDICTED: Glycine max protein phosphatase 2C 29-like (LOC100775371), mRNA	protein phosphatase 2C 29-like(LOC100775371)	coding protein	psRNATarget
XM_014761535.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||||||||||||||||** targets:1104   UUUUGUUUUGUUUUAUUUUU   1123 Target Full Sequence	2.5	PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 18-like (LOC100803031), transcript variant X2, mRNA	mediator of RNA polymerase II transcription subunit 18-like(LOC100803031)	coding protein	psRNATarget
XM_006586627.2	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||||||||||||||||** targets:1051   UUUUGUUUUGUUUUAUUUUU   1070 Target Full Sequence	2.5	PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 18-like (LOC100803031), transcript variant X1, mRNA	mediator of RNA polymerase II transcription subunit 18-like(LOC100803031)	coding protein	psRNATarget
XM_014765077.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||*||||*|||||||||| targets:467   UUUUUUUUUUUUUUAUUUGG   486 Target Full Sequence	2.5	PREDICTED: Glycine max autophagy-related protein 18f-like (LOC100792344), transcript variant X1, mRNA	autophagy-related protein 18f-like(LOC100792344)	coding protein	psRNATarget
XM_014765078.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||*||||*|||||||||| targets:468   UUUUUUUUUUUUUUAUUUGG   487 Target Full Sequence	2.5	PREDICTED: Glycine max autophagy-related protein 18f-like (LOC100792344), transcript variant X2, mRNA	autophagy-related protein 18f-like(LOC100792344)	coding protein	psRNATarget
XM_006592822.2	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||*||||*|||||||||| targets:469   UUUUUUUUUUUUUUAUUUGG   488 Target Full Sequence	2.5	PREDICTED: Glycine max autophagy-related protein 18f-like (LOC100792344), transcript variant X3, mRNA	autophagy-related protein 18f-like(LOC100792344)	coding protein	psRNATarget
XM_003535966.3	ncRNA:20   AAAACAAAACAAAAUAAACC   1   |*||||||||||||||*||| targets:857   UCUUGUUUUGUUUUAUGUGG   876 Target Full Sequence	2.5	PREDICTED: Glycine max transmembrane protein 184A-like (LOC100814822), mRNA	transmembrane protein 184A-like(LOC100814822)	coding protein	psRNATarget
BT099010.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||*||||*|||||||||| targets:22   UUUUUUUUUUUUUUAUUUGG   41 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26D22 unknown mRNA	NA	coding protein	psRNATarget
XM_006601189.2	ncRNA:20   AAAACAAAACAAAAUAAACC   1   **||||||||||||*||||| targets:1139   AGUUGUUUUGUUUUUUUUGG   1158 Target Full Sequence	2.5	PREDICTED: Glycine max endo-1,4-beta-xylanase A-like (LOC100818319), transcript variant X1, mRNA	endo-1,4-beta-xylanase A-like(LOC100818319)	coding protein	psRNATarget
XM_014770025.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   **||||||||||||*||||| targets:1139   AGUUGUUUUGUUUUUUUUGG   1158 Target Full Sequence	2.5	PREDICTED: Glycine max endo-1,4-beta-xylanase A-like (LOC100818319), transcript variant X6, mRNA	endo-1,4-beta-xylanase A-like(LOC100818319)	coding protein	psRNATarget
XM_006601190.2	ncRNA:20   AAAACAAAACAAAAUAAACC   1   **||||||||||||*||||| targets:953   AGUUGUUUUGUUUUUUUUGG   972 Target Full Sequence	2.5	PREDICTED: Glycine max endo-1,4-beta-xylanase A-like (LOC100818319), transcript variant X2, mRNA	endo-1,4-beta-xylanase A-like(LOC100818319)	coding protein	psRNATarget
XM_014770024.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   **||||||||||||*||||| targets:897   AGUUGUUUUGUUUUUUUUGG   916 Target Full Sequence	2.5	PREDICTED: Glycine max endo-1,4-beta-xylanase A-like (LOC100818319), transcript variant X3, mRNA	endo-1,4-beta-xylanase A-like(LOC100818319)	coding protein	psRNATarget
XM_014766219.1	ncRNA:20   AAAACAAAACAAAAUAAACC   1   ||||*|||||||||*||||| targets:503   UUUUAUUUUGUUUUCUUUGG   522 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795621 (LOC106795621), mRNA	uncharacterized LOC106795621(LOC106795621)	coding protein	psRNATarget