ncRNA ID | novel_gma_miR3214 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:22446608-22446717 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670;SRR1451672;SRR1451674;SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UAAUGGAGAGCUCAUUUUAG - 20 |
Stem-loop(if miRNA) |
--                      CAAUUACCUA         A CU       -A   C   AAAAUGAGCUCUCCAUUAGCUA          AUUUGUAGA G  CUCUCAU  UAG U   ||||||||||||||||||||||          ||||||||| |  |||||||  ||| U   UUUUACUCGAGAGGUAAUCGAU          UAAAUAUCU C  GAGAGUA  AUC C GA                      ----------         A AG       GA   U |
Stem-loop sequence | AAAAUGAGCUCUCCAUUAGCUACAAUUACCUAAUUUGUAGAAGCUCUCUCAUAUAGCUUCUCUAAGAUGAGAGGACAUCUAUAAAUUAGCUAAUGGAGAGCUCAUUUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006603606.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA | uncharacterized LOC100500460(LOC100500460) | coding protein | psRNATarget | |||||||||
XM_006603608.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA | uncharacterized LOC100500460(LOC100500460) | coding protein | psRNATarget |