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BaseInfo

ncRNA ID novel_gma_miR3212
Species Glycine max
Class miRNA
Genome position Chr18:42243044-42243130 [+]
Reference genome Glycine_max_v2.0
Source SRR1294485
Length 20
Mature sequence(if miRNA) 68 - AUAUGGAUUGAUGAUCUGUA - 87
Stem-loop(if miRNA) --       A     G    U       UU     AAA   AAU
  CGGAUCA CAAUC GUAU AGUUUUU  UUAAA   AAU   U
  ||||||| ||||| |||| |||||||  |||||   |||
  GUCUAGU GUUAG UAUA UUAAAAA  AAUUU   UUA   A
AU       A     G    C       CC     -AA   AAA
Stem-loop sequence CGGAUCAACAAUCGGUAUUAGUUUUUUUUUAAAAAAAAUAAUUAAAAAUUAAUUUAACCAAAAAUUCAUAUGGAUUGAUGAUCUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524259.2
ncRNA:20   AUGUCUAGUAGUUAGGUAUA   1
  **||||*||||||||||||*
targets:2002   GUCAGAACAUCAAUCCAUAA   2021

3.0 PREDICTED: Glycine max cation/H(+) antiporter 15-like (LOC100779048), mRNA cation/H(+) antiporter 15-like(LOC100779048) coding protein psRNATarget