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BaseInfo

ncRNA ID	novel_gma_miR3210
Species	Glycine max
Class	miRNA
Genome position	Chr6:34685814-34685963 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	1 - CAAAACUGACAUGAAAUGAA - 20
Stem-loop(if miRNA)	--                  A   A     -----------AA   CUUUGUUCACUCUGAAAAUCAUCAUGGUCGUCUA   CAAAACUGACAUGAAAUG ACA CUCAU             UCU                                  U   |||||||||||||||||| ||| |||||             |||                                  U   GUUUUGACUGUACUUUAC UGU GAGUA             CAG                                  G AC                  C   C     CUACGUCUCACAA   UUAAACCUGACACUAAAAAGGGUACAUUAAUUUC
Stem-loop sequence	CAAAACUGACAUGAAAUGAACAACUCAUAAUCUCUUUGUUCACUCUGAAAAUCAUCAUGGUCGUCUAUUGCUUUAAUUACAUGGGAAAAAUCACAGUCCAAAUUGACAACACUCUGCAUCAUGAGCUGUCCAUUUCAUGUCAGUUUUGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767600.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:12311   UUUAUUCCAUGUCAGUUUUG   12330 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X14, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767599.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:12332   UUUAUUCCAUGUCAGUUUUG   12351 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X13, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767593.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:12415   UUUAUUCCAUGUCAGUUUUG   12434 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X7, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767592.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13164   UUUAUUCCAUGUCAGUUUUG   13183 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X6, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767604.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13643   UUUAUUCCAUGUCAGUUUUG   13662 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X18, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767605.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13684   UUUAUUCCAUGUCAGUUUUG   13703 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X19, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767602.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13697   UUUAUUCCAUGUCAGUUUUG   13716 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X16, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767601.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13705   UUUAUUCCAUGUCAGUUUUG   13724 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X15, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767603.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13717   UUUAUUCCAUGUCAGUUUUG   13736 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X17, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767598.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13787   UUUAUUCCAUGUCAGUUUUG   13806 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X12, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767594.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13788   UUUAUUCCAUGUCAGUUUUG   13807 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X8, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767597.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13828   UUUAUUCCAUGUCAGUUUUG   13847 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X11, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767596.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13841   UUUAUUCCAUGUCAGUUUUG   13860 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X10, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767595.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13849   UUUAUUCCAUGUCAGUUUUG   13868 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X9, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767591.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13932   UUUAUUCCAUGUCAGUUUUG   13951 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X5, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767617.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13945   UUUAUUCCAUGUCAGUUUUG   13964 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X31, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget
XM_014767607.1	ncRNA:20   AAGUAAAGUACAGUCAAAAC   1   ||=|||*||||||||||||| targets:13972   UUUAUUCCAUGUCAGUUUUG   13991 Target Full Sequence	2.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X21, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget