ncRNA ID | novel_gma_miR3208 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:3703217-3703358 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670;SRR1451672;SRR1451674 |
Length | 21 |
Mature sequence(if miRNA) | 122 - AUAAAUAUAUUACAAGAACAA - 142 |
Stem-loop(if miRNA) |
--  C  A      A   C      --------            -GUAAUUCA    UUU    ACAUUAUAAAA   GU CU GUAAUA AUU AUUUUU        UCCUUGUAAUAU         UUUG   UUAG           A   || || |||||| ||| ||||||        ||||||||||||         ||||   ||||   CA GA CAUUAU UAA UAAAAA        AGGAAUAUUAUA         AAAC   AAUC           A AA  A  A      A   A      AUAAAAUC            AAACAACUA    -UU    AAAAAAAAUUA |
Stem-loop sequence | GUCCUAGUAAUAAAUUCAUUUUUUCCUUGUAAUAUGUAAUUCAUUUGUUUUUAGACAUUAUAAAAAAAUUAAAAAAAACUAAUUCAAAAUCAACAAAAUAUUAUAAGGACUAAAAUAAAAAAUAAAUAUAUUACAAGAACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003536212.3 |
|
2.5 | PREDICTED: Glycine max oxidation resistance protein 1-like (LOC100812871), mRNA | oxidation resistance protein 1-like(LOC100812871) | coding protein | psRNATarget |