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BaseInfo

ncRNA ID novel_gma_miR3208
Species Glycine max
Class miRNA
Genome position Chr11:3703217-3703358 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670;SRR1451672;SRR1451674
Length 21
Mature sequence(if miRNA) 122 - AUAAAUAUAUUACAAGAACAA - 142
Stem-loop(if miRNA) --  C  A      A   C      --------            -GUAAUUCA    UUU    ACAUUAUAAAA
  GU CU GUAAUA AUU AUUUUU        UCCUUGUAAUAU         UUUG   UUAG           A
  || || |||||| ||| ||||||        ||||||||||||         ||||   ||||
  CA GA CAUUAU UAA UAAAAA        AGGAAUAUUAUA         AAAC   AAUC           A
AA  A  A      A   A      AUAAAAUC            AAACAACUA    -UU    AAAAAAAAUUA
Stem-loop sequence GUCCUAGUAAUAAAUUCAUUUUUUCCUUGUAAUAUGUAAUUCAUUUGUUUUUAGACAUUAUAAAAAAAUUAAAAAAAACUAAUUCAAAAUCAACAAAAUAUUAUAAGGACUAAAAUAAAAAAUAAAUAUAUUACAAGAACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536212.3
ncRNA:21   AACAAGAACAUUAUAUAAAUA   1
  ***||||||||=|||||||||
targets:1194   AAAUUCUUGUAGUAUAUUUAU   1214

2.5 PREDICTED: Glycine max oxidation resistance protein 1-like (LOC100812871), mRNA oxidation resistance protein 1-like(LOC100812871) coding protein psRNATarget