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BaseInfo

ncRNA ID	novel_gma_miR3197
Species	Glycine max
Class	miRNA
Genome position	Chr5:34542760-34542830 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	52 - AUUCUUAAUUUCCUUUUCCA - 71
Stem-loop(if miRNA)	- AU        C      -    UCCCAA    C  G  GAAGGAAG UAGGAA AGUG      GUGG U  |  |||||||| |||||| ||||      |||| G  C  UUUCCUUU AUUCUU UUAU      UACU U A CU        A      A    UGUAUG    A
Stem-loop sequence	GAUGAAGGAAGCUAGGAAAGUGUCCCAAGUGGCUGUAUCAUGUAUGUUAUUAUUCUUAAUUUCCUUUUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT095297.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   |||||||||||||||||||| targets:171   UGGAAAAGGAAAUUAAGAAU   190 Target Full Sequence	0.0	Soybean clone JCVI-FLGm-7I21 unknown mRNA	NA	coding protein	psRNATarget
XM_003556354.3	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:716   AGGUGAAGGAAAUUAAGAAU   735 Target Full Sequence	2.0	PREDICTED: Glycine max chlorophyll a-b binding protein CP26, chloroplastic (LOC100817348), mRNA	chlorophyll a-b binding protein CP26, chloroplastic(LOC100817348)	coding protein	psRNATarget
AK243978.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:732   AGGUGAAGGAAAUUAAGAAU   751 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-01-M08	NA	coding protein	psRNATarget
XM_003536141.3	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:739   AGGUGAAGGAAAUUAAGAAU   758 Target Full Sequence	2.0	PREDICTED: Glycine max chlorophyll a-b binding protein CP26, chloroplastic (LOC100820327), mRNA	chlorophyll a-b binding protein CP26, chloroplastic(LOC100820327)	coding protein	psRNATarget
AK285370.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:696   AGGUGAAGGAAAUUAAGAAU   715 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-08-D11	NA	coding protein	psRNATarget
XM_003534000.3	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:766   AGGUGAAGGAAAUUAAGAAU   785 Target Full Sequence	2.0	PREDICTED: Glycine max chlorophyll a-b binding protein CP26, chloroplastic (LOC100806585), mRNA	chlorophyll a-b binding protein CP26, chloroplastic(LOC100806585)	coding protein	psRNATarget
AK243814.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:696   AGGUGAAGGAAAUUAAGAAU   715 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-01-F07	NA	coding protein	psRNATarget
AK285884.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:1029   AGGUGAAGGAAAUUAAGAAU   1048 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-17-P09	NA	coding protein	psRNATarget
AK286146.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:1266   AGGUGAAGGAAAUUAAGAAU   1285 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-22-K15	NA	coding protein	psRNATarget
AK243959.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *||*=||||||||||||||| targets:1314   AGGUGAAGGAAAUUAAGAAU   1333 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-01-L13	NA	coding protein	psRNATarget
XM_006577193.2	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   |*|||||||=|||||||||| targets:670   UUGAAAAGGGAAUUAAGAAU   689 Target Full Sequence	2.5	PREDICTED: Glycine max GDSL esterase/lipase At1g54790-like (LOC100784886), transcript variant X2, mRNA	GDSL esterase/lipase At1g54790-like(LOC100784886)	coding protein	psRNATarget
XM_006577192.2	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   |*|||||||=|||||||||| targets:691   UUGAAAAGGGAAUUAAGAAU   710 Target Full Sequence	2.5	PREDICTED: Glycine max GDSL esterase/lipase At1g54790-like (LOC100784886), transcript variant X1, mRNA	GDSL esterase/lipase At1g54790-like(LOC100784886)	coding protein	psRNATarget
XM_014772543.1	ncRNA:20   ACCUUUUCCUUUAAUUCUUA   1   *|||||||||||*||||||* targets:2773   GGGAAAAGGAAAGUAAGAAA   2792 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like serine/threonine-protein kinase At4g25390 (LOC100814336), mRNA	receptor-like serine/threonine-protein kinase At4g25390(LOC100814336)	coding protein	psRNATarget