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BaseInfo

ncRNA ID novel_gma_miR3192
Species Glycine max
Class miRNA
Genome position Chr4:8034765-8034851 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 21
Mature sequence(if miRNA) 1 - CUUCUUCUACUUCUAUGCACU - 21
Stem-loop(if miRNA) --     -   -       UACG    -UCCC   UCUCGUG  U
  UGCAU GAA UGGGGGA    GAGA     UUG       GC U
  ||||| ||| |||||||    ||||     |||       ||
  ACGUA CUU AUCUUCU    CUCU     AAC       CG A
UC     U   C       UCCA    UUAUU   UCUUUCA  C
Stem-loop sequence UGCAUGAAUGGGGGAUACGGAGAUCCCUUGUCUCGUGGCUUACGCACUUUCUCAAUUAUUUCUCACCUUCUUCUACUUCUAUGCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532367.3
ncRNA:21   UCACGUAUCUUCAUCUUCUUC   1
  |*|||||||||||=||||||*
targets:2535   AUUGCAUAGAAGUGGAAGAAU   2555

2.5 PREDICTED: Glycine max mitogen-activated protein kinase kinase kinase YODA-like (LOC100814422), transcript variant X2, mRNA mitogen-activated protein kinase kinase kinase YODA-like(LOC100814422) coding protein psRNATarget
XM_006584662.2
ncRNA:21   UCACGUAUCUUCAUCUUCUUC   1
  |*|||||||||||=||||||*
targets:2525   AUUGCAUAGAAGUGGAAGAAU   2545

2.5 PREDICTED: Glycine max mitogen-activated protein kinase kinase kinase YODA-like (LOC100814422), transcript variant X1, mRNA mitogen-activated protein kinase kinase kinase YODA-like(LOC100814422) coding protein psRNATarget