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ncRNA ID novel_gma_miR3185
Species Glycine max
Class miRNA
Genome position Chr4:51799915-51799984 [-]
Reference genome Glycine_max_v2.0
Source SRR1451670
Length 20
Mature sequence(if miRNA) 1 - AUAUAUGUAUGUAUGUGUAG - 20
Stem-loop(if miRNA) A                                U
 UAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUA A
 ||||||||||||||||||||||||||||||||
 AUGUGUAUGUAUGUAUAUAUAUAUAUAUAUAU U
G                                A
Stem-loop sequence AUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUGUAUGUAUGUGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602560.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =|=|||||||||||||||||
targets:297   UUGCACAUACAUACAUAUAU   316

1.0 PREDICTED: Glycine max transcription factor MYB90-like (LOC100798101), mRNA transcription factor MYB90-like(LOC100798101) coding protein psRNATarget
XM_006598621.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=||||||||||||||||
targets:188   AUAUACAUACAUACAUAUAU   207

1.0 PREDICTED: Glycine max protein kinase family protein (LOC100305436), transcript variant X1, mRNA protein kinase family protein(LOC100305436) coding protein psRNATarget
XM_006598625.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=||||||||||||||||
targets:188   AUAUACAUACAUACAUAUAU   207

1.0 PREDICTED: Glycine max protein kinase family protein (LOC100305436), transcript variant X5, mRNA protein kinase family protein(LOC100305436) coding protein psRNATarget
XM_006598623.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=||||||||||||||||
targets:188   AUAUACAUACAUACAUAUAU   207

1.0 PREDICTED: Glycine max protein kinase family protein (LOC100305436), transcript variant X2, mRNA protein kinase family protein(LOC100305436) coding protein psRNATarget
XM_006598622.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=||||||||||||||||
targets:188   AUAUACAUACAUACAUAUAU   207

1.0 PREDICTED: Glycine max protein kinase family protein (LOC100305436), transcript variant X3, mRNA protein kinase family protein(LOC100305436) coding protein psRNATarget
XM_006598624.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=||||||||||||||||
targets:188   AUAUACAUACAUACAUAUAU   207

1.0 PREDICTED: Glycine max protein kinase family protein (LOC100305436), transcript variant X4, mRNA protein kinase family protein(LOC100305436) coding protein psRNATarget
XM_006594430.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=||||||||||||||||
targets:241   AUAUACAUACAUACAUAUAU   260

1.0 PREDICTED: Glycine max monothiol glutaredoxin-S10-like (LOC100784069), mRNA monothiol glutaredoxin-S10-like(LOC100784069) coding protein psRNATarget
XM_006594209.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||||||||||||||||||*
targets:1068   AUACACAUACAUACAUAUAC   1087

1.0 PREDICTED: Glycine max ethylene-responsive transcription factor WIN1-like (LOC100814893), mRNA ethylene-responsive transcription factor WIN1-like(LOC100814893) coding protein psRNATarget
XM_006604141.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||==|||||||||||||
targets:680   UUACAUGUACAUACAUAUAU   699

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g30570 (LOC100820178), transcript variant X2, mRNA probable receptor-like protein kinase At1g30570(LOC100820178) coding protein psRNATarget
XM_006604142.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||==|||||||||||||
targets:680   UUACAUGUACAUACAUAUAU   699

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g30570 (LOC100820178), transcript variant X1, mRNA probable receptor-like protein kinase At1g30570(LOC100820178) coding protein psRNATarget
XM_014772176.1
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||==|||||||||||||
targets:680   UUACAUGUACAUACAUAUAU   699

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g30570 (LOC100820178), transcript variant X4, mRNA probable receptor-like protein kinase At1g30570(LOC100820178) coding protein psRNATarget
XM_003553937.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||==|||||||||||||
targets:680   UUACAUGUACAUACAUAUAU   699

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g30570 (LOC100820178), transcript variant X5, mRNA probable receptor-like protein kinase At1g30570(LOC100820178) coding protein psRNATarget
XM_006604143.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||==|||||||||||||
targets:680   UUACAUGUACAUACAUAUAU   699

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g30570 (LOC100820178), transcript variant X3, mRNA probable receptor-like protein kinase At1g30570(LOC100820178) coding protein psRNATarget
XM_006604144.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||==|||||||||||||
targets:680   UUACAUGUACAUACAUAUAU   699

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g30570 (LOC100820178), transcript variant X6, mRNA probable receptor-like protein kinase At1g30570(LOC100820178) coding protein psRNATarget
XM_003528016.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||=|=||||||||||||||
targets:170   UUAUAUAUACAUACAUAUAU   189

2.0 PREDICTED: Glycine max beta-galactosidase 6-like (LOC100818637), mRNA beta-galactosidase 6-like(LOC100818637) coding protein psRNATarget
XM_003550313.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|=||||||||||||||
targets:1718   AUAUAUAUACAUACAUAUAU   1737

2.0 PREDICTED: Glycine max F-box/FBD/LRR-repeat protein At1g13570-like (LOC100782183), mRNA F-box/FBD/LRR-repeat protein At1g13570-like(LOC100782183) coding protein psRNATarget
XM_003536343.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|=||||||||||||||
targets:1520   AUAUAUAUACAUACAUAUAU   1539

2.0 PREDICTED: Glycine max alpha-(1,4)-fucosyltransferase-like (LOC100792300), mRNA alpha-(1,4)-fucosyltransferase-like(LOC100792300) coding protein psRNATarget
XM_003541363.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  **|=||||||||||||||||
targets:814   AAAUACAUACAUACAUAUAU   833

2.0 PREDICTED: Glycine max uncharacterized LOC100803312 (LOC100803312), transcript variant X1, mRNA uncharacterized LOC100803312(LOC100803312) coding protein psRNATarget
XM_006594081.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  **|=||||||||||||||||
targets:808   AAAUACAUACAUACAUAUAU   827

2.0 PREDICTED: Glycine max uncharacterized LOC100803312 (LOC100803312), transcript variant X2, mRNA uncharacterized LOC100803312(LOC100803312) coding protein psRNATarget
XM_003550412.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  ||=||||||||||=||||||
targets:1661   CUGCACAUACAUAUAUAUAU   1680

2.5 PREDICTED: Glycine max transcription factor JUNGBRUNNEN 1 (LOC100792622), mRNA transcription factor JUNGBRUNNEN 1(LOC100792622) coding protein psRNATarget
XM_003547336.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  |||||||||=|||||||||*
targets:1741   CUACACAUAUAUACAUAUAC   1760

2.5 PREDICTED: Glycine max protein DETOXIFICATION 55-like (LOC100785533), mRNA protein DETOXIFICATION 55-like(LOC100785533) coding protein psRNATarget
XM_003550283.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =||||=|||=||||||||||
targets:218   UUACAUAUAUAUACAUAUAU   237

2.5 PREDICTED: Glycine max ethylene-responsive transcription factor RAP2-1-like (LOC100810839), mRNA ethylene-responsive transcription factor RAP2-1-like(LOC100810839) coding protein psRNATarget
NM_001249797.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|||||||||=||||||
targets:80   AUAUACAUACAUAUAUAUAU   99

2.5 Glycine max 6-phosphogluconate dehydrogenase (GND), mRNA 6-phosphogluconate dehydrogenase(GND) coding protein psRNATarget
XM_003539020.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|||||||||=||||||
targets:1593   AUAUACAUACAUAUAUAUAU   1612

2.5 PREDICTED: Glycine max uncharacterized LOC100787401 (LOC100787401), mRNA uncharacterized LOC100787401(LOC100787401) coding protein psRNATarget
XM_006588618.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||||=|||=||||||||||
targets:1270   GUACAUAUAUAUACAUAUAU   1289

2.5 PREDICTED: Glycine max NAC domain-containing protein 21/22-like (LOC100783645), mRNA NAC domain-containing protein 21/22-like(LOC100783645) coding protein psRNATarget
XM_006606507.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|||||=||||||||||
targets:1347   AUAUACAUAUAUACAUAUAU   1366

2.5 PREDICTED: Glycine max uncharacterized LOC102668095 (LOC102668095), mRNA uncharacterized LOC102668095(LOC102668095) coding protein psRNATarget
XM_014763451.1
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|||||=||||||||||
targets:1335   AUAUACAUAUAUACAUAUAU   1354

2.5 PREDICTED: Glycine max uncharacterized LOC102665856 (LOC102665856), transcript variant X1, mRNA uncharacterized LOC102665856(LOC102665856) coding protein psRNATarget
XM_006589710.2
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||=|||||=||||||||||
targets:1177   AUAUACAUAUAUACAUAUAU   1196

2.5 PREDICTED: Glycine max uncharacterized LOC102665856 (LOC102665856), transcript variant X2, mRNA uncharacterized LOC102665856(LOC102665856) coding protein psRNATarget
XM_003528674.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  ||=||||||||*||||||||
targets:1496   CUGCACAUACACACAUAUAU   1515

2.5 PREDICTED: Glycine max putative NAC domain-containing protein 94 (LOC100812779), mRNA putative NAC domain-containing protein 94(LOC100812779) coding protein psRNATarget
XM_003550560.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  **||||||||=|||||||||
targets:266   ACACACAUACGUACAUAUAU   285

2.5 PREDICTED: Glycine max aspartic proteinase-like protein 2 (LOC100795803), mRNA aspartic proteinase-like protein 2(LOC100795803) coding protein psRNATarget
XM_003528147.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *||||||||||||=|||||*
targets:1484   AUACACAUACAUAUAUAUAG   1503

2.5 PREDICTED: Glycine max probable galacturonosyltransferase-like 1 (LOC100818099), mRNA probable galacturonosyltransferase-like 1(LOC100818099) coding protein psRNATarget
XM_003528410.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  *|||||||||||||||=||*
targets:1543   AUACACAUACAUACAUGUAA   1562

2.5 PREDICTED: Glycine max uncharacterized LOC100812414 (LOC100812414), mRNA uncharacterized LOC100812414(LOC100812414) coding protein psRNATarget
XM_003554303.3
ncRNA:20   GAUGUGUAUGUAUGUAUAUA   1
  =|==|=||||||||||||||
targets:180   UUGUAUAUACAUACAUAUAU   199

3.0 PREDICTED: Glycine max WRKY transcription factor 44-like (LOC100794069), mRNA WRKY transcription factor 44-like(LOC100794069) coding protein psRNATarget
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