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BaseInfo

ncRNA ID	novel_gma_miR3175
Species	Glycine max
Class	miRNA
Genome position	Chr3:43883364-43883478 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	19
Mature sequence(if miRNA)	97 - UUAUUUUCAGUUUAAUUUG - 115
Stem-loop(if miRNA)	-   U   C             -     -      -C     AGUUUUCUU     CA  UUA UUU AGUUUAAUUUGUU AAAUG UUUAAU  AAGUU         AGCCU  C  ||| ||| ||||||||||||| ||||| ||||||  |||||         |||||  A  AGU AGA UCGAAUUAAAUAA UUUAU AAAUUG  UUUAG         UUGGA  A U   U   A             A     U      AA     GUUUUAUAU     UA
Stem-loop sequence	UUAUUUUCAGUUUAAUUUGUUAAAUGUUUAAUCAAGUUAGUUUUCUUAGCCUCACAAAUAGGUUUAUAUUUUGGAUUUAAGUUAAAUUAUUUAAAUAAAUUAAGCUAAGAUUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006578797.2	ncRNA:19   GUUUAAUUUGACUUUUAUU   1   |||||||||||*||||||= targets:29   CAAAUUAAACUAAAAAUAG   47 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100795129 (LOC100795129), transcript variant X2, mRNA	uncharacterized LOC100795129(LOC100795129)	coding protein	psRNATarget
XM_014774917.1	ncRNA:19   GUUUAAUUUGACUUUUAUU   1   |||||||||||*||||||= targets:405   CAAAUUAAACUAAAAAUAG   423 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100795129 (LOC100795129), transcript variant X3, mRNA	uncharacterized LOC100795129(LOC100795129)	coding protein	psRNATarget
XM_014774916.1	ncRNA:19   GUUUAAUUUGACUUUUAUU   1   |||||||||||*||||||= targets:405   CAAAUUAAACUAAAAAUAG   423 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100795129 (LOC100795129), transcript variant X1, mRNA	uncharacterized LOC100795129(LOC100795129)	coding protein	psRNATarget
XM_003521557.3	ncRNA:19   GUUUAAUUUGACUUUUAUU   1   ||||*|||||||||||*|| targets:326   CAAAAUAAACUGAAAACAA   344 Target Full Sequence	2.5	PREDICTED: Glycine max boron transporter 1 (LOC100809823), mRNA	boron transporter 1(LOC100809823)	coding protein	psRNATarget