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BaseInfo

ncRNA ID	novel_gma_miR3173
Species	Glycine max
Class	miRNA
Genome position	Chr3:40032313-40032508 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670
Length	20
Mature sequence(if miRNA)	177 - AUUAAGUAAGAAAAUAAGGU - 196
Stem-loop(if miRNA)	--      A        U     C   C  CA              AAC       AUC      --AAAUAA           UGUUUUUCUCUCAUU   CUUAUU UUUUGCUU AGUUU AUC UU  AUUUAUUUAAGAUU   GUCGUUA   AUUUAA        UUUUUUUUGUU               C   |||||| |||||||| ||||| ||| ||  ||||||||||||||   |||||||   ||||||        |||||||||||               C   GAAUAA AGAAUGAA UUAAA UAG AA  UAAGUAAAUUCUAA   CAGCAAU   UAAAUU        AAAAAAAACAA               U UG      A        -     U   A  AC              CUA       GAA      CUAACUAA           UUUUAACUUCACCUC
Stem-loop sequence	CUUAUUAUUUUGCUUUAGUUUCAUCCUUCAAUUUAUUUAAGAUUAACGUCGUUAAUCAUUUAAAAAUAAUUUUUUUUGUUUGUUUUUCUCUCAUUCCUCUCCACUUCAAUUUUAACAAAAAAAAAAUCAAUCUUAAAUAAGUAACGACAUCAAUCUUAAAUGAAUCAAAAGAUUAAAUUAAGUAAGAAAAUAAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001249035.1	ncRNA:20   UGGAAUAAAAGAAUGAAUUA   1   |||*||||||=||||||||| targets:617   ACCAUAUUUUUUUACUUAAU   636 Target Full Sequence	2.5	Glycine max uncharacterized LOC100305478 (LOC100305478), mRNA	uncharacterized LOC100305478(LOC100305478)	coding protein	psRNATarget
BT089079.1	ncRNA:20   UGGAAUAAAAGAAUGAAUUA   1   |||*||||||=||||||||| targets:617   ACCAUAUUUUUUUACUUAAU   636 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-1E9 unknown mRNA	NA	coding protein	psRNATarget
BT089459.1	ncRNA:20   UGGAAUAAAAGAAUGAAUUA   1   ||||||*|||||||*||||| targets:547   ACCUUAAUUUCUUAAUUAAU   566 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-2C13 unknown mRNA	NA	coding protein	psRNATarget
NM_001248729.2	ncRNA:20   UGGAAUAAAAGAAUGAAUUA   1   ||||||*|||||||*||||| targets:545   ACCUUAAUUUCUUAAUUAAU   564 Target Full Sequence	2.5	Glycine max uncharacterized LOC100305713 (LOC100305713), mRNA	uncharacterized LOC100305713(LOC100305713)	coding protein	psRNATarget