ncRNA ID | novel_gma_miR3168 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:21656194-21656292 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670 |
Length | 20 |
Mature sequence(if miRNA) | 80 - UUGUAUGUUCAUUUUUUAUU - 99 |
Stem-loop(if miRNA) |
--     UG   A           ----------UUUUC       -  --C  CU   UUGUA  UUC UUUUUUAUUUA               AUUUACA UG   UC  C   |||||  ||| |||||||||||               ||||||| ||   ||   GACGU  AAG AAGAGAUGGGU               UAAAUGU AC   AG  A CA     UA   A           UUUUUAAUAUUUAUU       C  UAU  AA |
Stem-loop sequence | UUGUAUGUUCAUUUUUUAUUUAUUUUCAUUUACAUGCUCCUCAAAGAUAUCACUGUAAAUUUAUUUAUAAUUUUUUGGGUAGAGAAAGAAAUUGCAGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518195.2 |
|
2.5 | PREDICTED: Glycine max RING-H2 finger protein ATL34-like (LOC100807292), mRNA | RING-H2 finger protein ATL34-like(LOC100807292) | coding protein | psRNATarget | |||||||||
XM_006592099.2 |
|
2.5 | PREDICTED: Glycine max cyanogenic beta-glucosidase-like (LOC106794108), mRNA | cyanogenic beta-glucosidase-like(LOC106794108) | coding protein | psRNATarget |