ncRNA ID | novel_gma_miR3148 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:45497396-45497537 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451670;SRR1451677 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUUUCAUGGAUGUUGUUAGUG - 21 |
Stem-loop(if miRNA) |
--AUU        -       G   CGU    C        A    A   C    A GUAUUACUAUUGAUUU      UCAUGGAU GUUGUUA UGU   UCUC AAUUAAAA UGGC UUU AUCU G                U      |||||||| ||||||| |||   |||| |||||||| |||| ||| |||| |      GGUGUCUA CGACAAU ACA   AGAG UUAGUUUU GUUG AAA UAGA C                A GUUAU        A       G   ---    U        A    A   A    C UUUUAGUACCAUUGAU |
Stem-loop sequence | AUUUCAUGGAUGUUGUUAGUGUCGUUCUCCAAUUAAAAAUGGCAUUUCAUCUAGGUAUUACUAUUGAUUUUAUAGUUACCAUGAUUUUCCAGAUAAAAAGUUGAUUUUGAUUUGAGAACAGUAACAGCAAUCUGUGGUAUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT097784.1 |
|
0.0 | Soybean clone JCVI-FLGm-22F1 unknown mRNA | NA | coding protein | psRNATarget |