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BaseInfo

ncRNA ID novel_gma_miR3148
Species Glycine max
Class miRNA
Genome position Chr20:45497396-45497537 [+]
Reference genome Glycine_max_v2.0
Source SRR1451670;SRR1451677
Length 21
Mature sequence(if miRNA) 1 - AUUUCAUGGAUGUUGUUAGUG - 21
Stem-loop(if miRNA) --AUU        -       G   CGU    C        A    A   C    A GUAUUACUAUUGAUUU
     UCAUGGAU GUUGUUA UGU   UCUC AAUUAAAA UGGC UUU AUCU G                U
     |||||||| ||||||| |||   |||| |||||||| |||| ||| |||| |
     GGUGUCUA CGACAAU ACA   AGAG UUAGUUUU GUUG AAA UAGA C                A
GUUAU        A       G   ---    U        A    A   A    C UUUUAGUACCAUUGAU
Stem-loop sequence AUUUCAUGGAUGUUGUUAGUGUCGUUCUCCAAUUAAAAAUGGCAUUUCAUCUAGGUAUUACUAUUGAUUUUAUAGUUACCAUGAUUUUCCAGAUAAAAAGUUGAUUUUGAUUUGAGAACAGUAACAGCAAUCUGUGGUAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097784.1
ncRNA:21   GUGAUUGUUGUAGGUACUUUA   1
  |||||||||||||||||||||
targets:73   CACUAACAACAUCCAUGAAAU   93

0.0 Soybean clone JCVI-FLGm-22F1 unknown mRNA NA coding protein psRNATarget