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BaseInfo

ncRNA ID	novel_gma_miR3143
Species	Glycine max
Class	miRNA
Genome position	Chr19:6745932-6746028 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451670;SRR1451672;SRR2045371
Length	21
Mature sequence(if miRNA)	77 - UGGUGAUUUUCAAUCAAUUUC - 97
Stem-loop(if miRNA)	--    U      C                GG        ----C   UG   AAUU AUUGGA AUCACCAAUUUUGGUG  UCUCACUU     UCA  A   |||| |||||| ||||||||||||||||  ||||||||     |||  C   UUAA UAACUU UAGUGGUUAAAACCAC  AGGGUGAA     AGU  U CU    C      U                UA        AAUUU   UC
Stem-loop sequence	AAUUUAUUGGACAUCACCAAUUUUGGUGGGUCUCACUUCUCAUGACUCUUGAUUUAAAAGUGGGAAUCACCAAAAUUGGUGAUUUUCAAUCAAUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003542268.3	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *=|||||*|||||||||||=| targets:1213   AGAAUUGUUUGAAAAUCACUA   1233 Target Full Sequence	2.5	PREDICTED: Glycine max GDSL esterase/lipase At2g04570-like (LOC100820032), mRNA	GDSL esterase/lipase At2g04570-like(LOC100820032)	coding protein	psRNATarget
XM_006595964.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   **|||*|||||||||||||=| targets:1964   UUAAUAGAUUGAAAAUCACUA   1984 Target Full Sequence	2.5	PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X5, mRNA	guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223)	coding protein	psRNATarget
XM_006595963.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   **|||*|||||||||||||=| targets:2073   UUAAUAGAUUGAAAAUCACUA   2093 Target Full Sequence	2.5	PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X3, mRNA	guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223)	coding protein	psRNATarget
XM_006595962.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   **|||*|||||||||||||=| targets:2084   UUAAUAGAUUGAAAAUCACUA   2104 Target Full Sequence	2.5	PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X2, mRNA	guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223)	coding protein	psRNATarget
XM_003544498.3	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   **|||*|||||||||||||=| targets:2111   UUAAUAGAUUGAAAAUCACUA   2131 Target Full Sequence	2.5	PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X4, mRNA	guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223)	coding protein	psRNATarget
XM_006595961.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   **|||*|||||||||||||=| targets:2131   UUAAUAGAUUGAAAAUCACUA   2151 Target Full Sequence	2.5	PREDICTED: Glycine max guanine nucleotide-binding protein alpha-2 subunit-like (LOC100781223), transcript variant X1, mRNA	guanine nucleotide-binding protein alpha-2 subunit-like(LOC100781223)	coding protein	psRNATarget
NM_001254553.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*||||||||||||*| targets:1729   AAAAUUUAUUGAAAAUCACAA   1749 Target Full Sequence	2.5	Glycine max uncharacterized LOC100813539 (LOC100813539), mRNA	uncharacterized LOC100813539(LOC100813539)	coding protein	psRNATarget
XM_006600156.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*||||||||||||*| targets:1677   AAAAUUUAUUGAAAAUCACAA   1697 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813539 (LOC100813539), transcript variant X4, mRNA	uncharacterized LOC100813539(LOC100813539)	coding protein	psRNATarget
XM_006600157.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*||||||||||||*| targets:1897   AAAAUUUAUUGAAAAUCACAA   1917 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813539 (LOC100813539), transcript variant X5, mRNA	uncharacterized LOC100813539(LOC100813539)	coding protein	psRNATarget
XM_006600158.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*||||||||||||*| targets:1963   AAAAUUUAUUGAAAAUCACAA   1983 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813539 (LOC100813539), transcript variant X2, mRNA	uncharacterized LOC100813539(LOC100813539)	coding protein	psRNATarget
XM_006600155.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*||||||||||||*| targets:1981   AAAAUUUAUUGAAAAUCACAA   2001 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813539 (LOC100813539), transcript variant X3, mRNA	uncharacterized LOC100813539(LOC100813539)	coding protein	psRNATarget
XM_014769325.1	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*||||||||||||*| targets:2056   AAAAUUUAUUGAAAAUCACAA   2076 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813539 (LOC100813539), transcript variant X1, mRNA	uncharacterized LOC100813539(LOC100813539)	coding protein	psRNATarget
XM_014779337.1	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*|||*|||||||||| targets:2962   AAAAUUUAUUAAAAAUCACCA   2982 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At5g40405 (LOC100795404), transcript variant X2, mRNA	putative pentatricopeptide repeat-containing protein At5g40405(LOC100795404)	coding protein	psRNATarget
XM_006585937.2	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*|||*|||||||||| targets:3085   AAAAUUUAUUAAAAAUCACCA   3105 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At5g40405 (LOC100795404), transcript variant X1, mRNA	putative pentatricopeptide repeat-containing protein At5g40405(LOC100795404)	coding protein	psRNATarget
XM_014779339.1	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*|||*|||||||||| targets:3170   AAAAUUUAUUAAAAAUCACCA   3190 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At5g40405 (LOC100795404), transcript variant X4, mRNA	putative pentatricopeptide repeat-containing protein At5g40405(LOC100795404)	coding protein	psRNATarget
XM_014779338.1	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   *|||||*|||*|||||||||| targets:3182   AAAAUUUAUUAAAAAUCACCA   3202 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At5g40405 (LOC100795404), transcript variant X3, mRNA	putative pentatricopeptide repeat-containing protein At5g40405(LOC100795404)	coding protein	psRNATarget
XM_003533281.3	ncRNA:21   CUUUAACUAACUUUUAGUGGU   1   ***||||||||||||||||*| targets:1777   CUUAUUGAUUGAAAAUCACAA   1797 Target Full Sequence	2.5	PREDICTED: Glycine max protein pleiotropic regulatory locus 1 (LOC100782357), mRNA	protein pleiotropic regulatory locus 1(LOC100782357)	coding protein	psRNATarget